Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0260 ATGGCGGCTTCCGTCGAGCAGCGTCCGTACACCGGACTCCACAACGGCGTCGTTCGCGCCTTCAAGTCAATCCCTGACGCCATGCGTCCCAAGAAGCTACCCCAACCGGCGCCGCCACTCTCGGATTCCTCGAGCGACGACGAAGACGACACCGCTTTGCAGGAGCTGATTCGTAAGGGAACCGCTGAGGTGGAGTCCTCCATTTTCGACCCGCGAGACGAAGGAGCATCCGACCACTGGATCCAGCGTAACGGCTCCCTGGTCCGTTTGACAGGGAAGCACCCCTTCAACTCGGAACCACCCCTCCCTCGCCTCATGCACCACGGCTTCATCACCCCTGTCCCCCTCCACTACGTCCGCAACCACGGGCCCGTCCCCCGGGCCCGTTGGGAGGACTGGACCGTAGAGGTAACGGGCCTCGTCACCCGGCCCACACGCTTCACCATGGAACAACTCTTCCACGACTTCCCCAGCCGCGAGTTCCCCGCCACACTCGTCTGCGCTGGGAACAGACGCAAGGAGCAGAACATGGTGAAACAGAGCATCGGCTTCAACTGGGGCGCCGCCGCCATCTCCACTTCGGTTTGGCGCGGTGTGCCCTTGCGGACCCTGCTCAAACGCTGCGGGATCTACACCCGCACCAAAGGCGCGCTCCACGTGTGCTTCGAAGGAGCTGAGGATCTGCCAGGTGGCGGTGGGTCCAAGTACGGAACCAGTATCCTGAGGGAGGTTGCATTGGATCCCTCCCGCGACATCATCCTCGCCTACATGCAAAACGGTGAGCGCTTGTCCCCGGATCACGGCTTCCCGGTTAGAATGATAATTCCCGGTTTTATTGGAGGCCGCATGGTCAAATGGTTGAAACGCATCATTGTCACCACCGAACAATCTGATAATTATTACCATTACAAGGATAACAGGGTACTCCCTTCTCACGTTGATGCTGAACTTGCCAACGCCGAAGCTTGGTGGTACAAGCCAGAGCATATTATCAACGAGCTTAACATAAACTCCGTGATAACCACGCCGTGCCATGATGAGATCTTGCCCATCAACGCGTGGACTACTCAGATGCCTTATTTCATCAGAGGCTACGCATACTCCGGTGGTGGGAGAAAGGTAACACGTGTTGAGGTAACACTAGACGGTGGTGAAACGTGGCAAGTGTGCACGCTGGACTGTCCGGAGAAACCTAGCAAATATGGAAAGTACTGGTGTTGGTGTTTTTGGTCTTTGGAAGTAGAGGTTTTGGACCTGCTCGGAGCCAAGGATATTGCGGTGCGTGCTTGGGACGAGGCCCTCAACACCCAACCAGAAAAGCTCATTTGGAATGTTATGGGCATGATGAACAACTGCTGGTTCAGGGTGAAAACGAACATGTGCAAGCCACACAAGGGTGAGATTGGAATAGTGTTCGAGCATCCCACCCAGCCAGGCAACCAATCCGGAGGATGGATGGCCAGAGAAAAACACCTGGAGAAATCATCAGACTCCAATCTAACTCTCAAGAAGAGTGTCTCCTCCCCATTCATGAACACCGCCGCAAAAACCTATACCATGTCGGAAGTGAGAAGGCATAACAACGCCGATTCGGCTTGGATCATAGTCCACGGCCATGTCTACGATTGCACCCGCTTCCTCAAAGACCATCCCGGCGGCACCGACAGCATCCTCATCAACGCCGGCACCGACTGCACCGAGGAGTTCGAAGCCATCCACTCCGACAAAGCCAAGAAAATGCTCGAAGACTACCGTATCGGCGAGCTCACCACCACCGGCTACACCTCCTCTGATTCTTCTTCATCGCCAAACCCCACCATGCATGGCAACTCCGACACCACCCATTTAGCCCCCATCAAGGAAGTCATCACACCACAACGCAGCGTGGCTCTTAACCCACGCGAGAAAATCCCATGCAAACTCATCTCCAAAATCTCCATCTCTCACGACGTTAGACTCTTCCGCTTTGCGCTTCCCTCCGATGACCAACTCATGGGTTTGCCAGTTGGCAAGCACTTATTTCTATGCGCCACCGTTGACGAAAAGCTATGCATGCGAGCCTACACTCCGACAAGCACAGTCGACGAAGTGGGATACTTCGACCTCGTCGTTAAGGTTTACTTCAAAGGGGTGCACCCTAAGTTCCCCAACGGTGGGATCATGTCTCAACACTTGGATTCCCTCCCCATTGGCGCTGTGTTGGACGTGAAGGGCCCACTTGGCCACATCGAATACACCGGCAGAGGTAACTTCCTCGTTAATGGGAAGCCAAGGTTTGCCAAAAGGCTAGCCATGTTGGCTGGTGGCACCGGGATCACACCCATTTATCAAGTGGTTCAGGCCATTCTAAAGGACCCGGAGGACCAAACCGAAATGCATGTGGTCTACGCGAACCGAACCGAGGATGATATATTGCTTAGGGAAGAGCTTGATGAGTGGGCTAAGAAGTATGACAGGTTCAAGGTGTGGTACGTGGTAGAAAGCCAAAGAGAAGGGTGGGAATACAGTGTGGGCTTCATCACCGAAAGTATCCTGAGGGAGCATATTCCACATGCATCTCCTGATACCTTGGCGTTGACTTGTGGACCACCACCCATGATTAAGTTCGCAGTGCAGCCGAATTTGGACAAGTTGGGCTACGACATCCACAACAACTTGCTCGTGTTTTAG 2670 0.5453 MAASVEQRPYTGLHNGVVRAFKSIPDAMRPKKLPQPAPPLSDSSSDDEDDTALQELIRKGTAEVESSIFDPRDEGASDHWIQRNGSLVRLTGKHPFNSEPPLPRLMHHGFITPVPLHYVRNHGPVPRARWEDWTVEVTGLVTRPTRFTMEQLFHDFPSREFPATLVCAGNRRKEQNMVKQSIGFNWGAAAISTSVWRGVPLRTLLKRCGIYTRTKGALHVCFEGAEDLPGGGGSKYGTSILREVALDPSRDIILAYMQNGERLSPDHGFPVRMIIPGFIGGRMVKWLKRIIVTTEQSDNYYHYKDNRVLPSHVDAELANAEAWWYKPEHIINELNINSVITTPCHDEILPINAWTTQMPYFIRGYAYSGGGRKVTRVEVTLDGGETWQVCTLDCPEKPSKYGKYWCWCFWSLEVEVLDLLGAKDIAVRAWDEALNTQPEKLIWNVMGMMNNCWFRVKTNMCKPHKGEIGIVFEHPTQPGNQSGGWMAREKHLEKSSDSNLTLKKSVSSPFMNTAAKTYTMSEVRRHNNADSAWIIVHGHVYDCTRFLKDHPGGTDSILINAGTDCTEEFEAIHSDKAKKMLEDYRIGELTTTGYTSSDSSSSPNPTMHGNSDTTHLAPIKEVITPQRSVALNPREKIPCKLISKISISHDVRLFRFALPSDDQLMGLPVGKHLFLCATVDEKLCMRAYTPTSTVDEVGYFDLVVKVYFKGVHPKFPNGGIMSQHLDSLPIGAVLDVKGPLGHIEYTGRGNFLVNGKPRFAKRLAMLAGGTGITPIYQVVQAILKDPEDQTEMHVVYANRTEDDILLREELDEWAKKYDRFKVWYVVESQREGWEYSVGFITESILREHIPHASPDTLALTCGPPPMIKFAVQPNLDKLGYDIHNNLLVF 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0260 889 Gene3D - 741 889 IPR039261 -
Aed10g0260 889 MobiDBLite consensus disorder prediction 592 618 - -
Aed10g0260 889 Pfam Oxidoreductase FAD-binding domain 639 745 IPR008333 -
Aed10g0260 889 MobiDBLite consensus disorder prediction 592 613 - -
Aed10g0260 889 SMART Cyt_b5_2 518 590 IPR001199 -
Aed10g0260 889 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 514 593 IPR036400 -
Aed10g0260 889 PRINTS Cytochrome B5 signature 565 572 IPR001199 -
Aed10g0260 889 PRINTS Cytochrome B5 signature 550 564 IPR001199 -
Aed10g0260 889 PRINTS Cytochrome B5 signature 577 589 IPR001199 -
Aed10g0260 889 PRINTS Cytochrome B5 signature 540 550 IPR001199 -
Aed10g0260 889 MobiDBLite consensus disorder prediction 24 51 - -
Aed10g0260 889 Gene3D - 72 323 IPR036374 -
Aed10g0260 889 PANTHER NADH-CYTOCHROME B5 REDUCTASE 48 889 IPR001834 GO:0016491
Aed10g0260 889 PIRSF Nitr_rd_NADH 14 888 IPR012137 GO:0006809|GO:0042128|GO:0050464
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 331 343 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 174 186 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 110 126 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 163 174 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 247 263 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 189 204 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 441 454 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 280 293 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 362 376 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 428 440 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 264 277 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 403 413 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 88 102 IPR008335 GO:0016491
Aed10g0260 889 PRINTS Eukaryotic molybdopterin domain signature 376 388 IPR008335 GO:0016491
Aed10g0260 889 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 634 746 IPR017927 GO:0016491
Aed10g0260 889 SUPERFAMILY Riboflavin synthase domain-like 628 746 IPR017938 -
Aed10g0260 889 CDD cyt_b5_reduct_like 639 881 - -
Aed10g0260 889 Pfam Oxidoreductase NAD-binding domain 765 871 IPR001433 GO:0016491
Aed10g0260 889 CDD eukary_NR_Moco 73 458 - -
Aed10g0260 889 SUPERFAMILY E set domains 333 458 IPR014756 -
Aed10g0260 889 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 733 883 IPR039261 -
Aed10g0260 889 Pfam Oxidoreductase molybdopterin binding domain 122 301 IPR000572 -
Aed10g0260 889 Gene3D - 333 508 - -
Aed10g0260 889 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 515 590 IPR001199 -
Aed10g0260 889 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 71 331 IPR036374 -
Aed10g0260 889 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 546 553 IPR018506 GO:0020037
Aed10g0260 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 833 849 IPR001709 GO:0016491
Aed10g0260 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 549 559 IPR001709 GO:0016491
Aed10g0260 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 857 865 IPR001709 GO:0016491
Aed10g0260 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 790 799 IPR001709 GO:0016491
Aed10g0260 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 802 813 IPR001709 GO:0016491
Aed10g0260 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 686 693 IPR001709 GO:0016491
Aed10g0260 889 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 764 783 IPR001709 GO:0016491
Aed10g0260 889 PANTHER NITRATE REDUCTASE 48 889 - -
Aed10g0260 889 Gene3D Translation factors 626 740 - -
Aed10g0260 889 PRINTS Cytochrome B5 reductase signature 686 693 - -
Aed10g0260 889 PRINTS Cytochrome B5 reductase signature 731 745 - -
Aed10g0260 889 PRINTS Cytochrome B5 reductase signature 764 783 - -
Aed10g0260 889 PRINTS Cytochrome B5 reductase signature 665 676 - -
Aed10g0260 889 PRINTS Cytochrome B5 reductase signature 802 813 - -
Aed10g0260 889 PRINTS Cytochrome B5 reductase signature 857 865 - -
Aed10g0260 889 Pfam Cytochrome b5-like Heme/Steroid binding domain 519 589 IPR001199 -
Aed10g0260 889 Pfam Mo-co oxidoreductase dimerisation domain 329 459 IPR005066 GO:0016491|GO:0030151
Aed10g0260 889 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 139 174 IPR022407 GO:0043546
Aed10g0260 889 Gene3D - 511 592 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0260 Aed-Chr10 2095339 2099931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0260 626 880 NADPH P450 reductases AT5G17770 39.147 6.55e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0260 K10534 - gmx:732634 1660.2