Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0257 ATGCATCACCTATCTCGGATTTTTGAGCACAGGAAACAAACCAAGGCCATGGATCACAAGAACCCGCGGAGAAAGCCCAAGCTCGAGCGCCGCAACGCTCTCAAGTACTCCTCCGAATACGACGCCGGATCCTCCAACTCCGACGACACGCTCTACACGCGCTCCATGGAGTTCTACGACCGCACCAGCTTCCGAATCGAGGGCGTCGAGGGCGAGTTCGATCGAATTTGCCGGAGTTTGGGCCTGTCGGGCCCGGAGGACTTCGCTATTCCCGCAGCGGCGTGGGAGGCCATGAAGTTTCGTTCCTCTTCGGATATTCTCCCGAGACTGAAGCTCGATAACCTCGATATTCCCGAGGAGGAGGAGGAGGAGGAAGAAGAAGGAGAGGAACACGAGGAGAGAATAGTAAAATCAGAAGAGGAAGGTGAATTGAGTGAAAATCACGGAGATATTGTTAGGGTTAGGGAGATAGATGAATCGAGCACTGGTATTAAGGGGGTTCGGCCACCGATGTTGAAGCCGCCGCCGGGGGTGAGGGTTCAGGTGGTGAACGATAGCGCGTGTTCCACGTGGGACCTTTTCAGGGACCTGGCTCCGCTAGAGGAAGAAGAGTTGGGGGCGACGAACCCTTCCAGTGATGAGAGGGAAGTGGCGGAGAAGGAAGAAGGGGAAGTTGGTGGTAGAGTGAGTCCGAAGAGGGAAGAGGTAGAGAATGGGGATAACGCAGCGAGGATTGCGGAGATTGTGGCTGGGCTTTCGGAGTCGTGTTCGTTTTCTACTTCGAATGAAGATGACTCTTCGAGTAGTACCACGGACCCTAAGTCTAATAATATCTCTCCGCAAGGGAGAATCAAGCGGATTATTACCGCCGGAAGCTGGCAGAAGGGTGAGTTTCTCGGCGGTGGCTCGTTTGGCTCCGTTTATGAAGGAATTTCTGATGATGGATTCTTTTTCGCTGTAAAAGAAGTGTCACTGCTTGATCAAGGGACTCAGGGAAAGCAAAGTGTATATCAACTGGAGCAGGAAATAGCACTTTTGAGTCAGTTTGAGCATGACAATATTGTTCAATATTATGGCACAGAAATGGATCAATCAAAGCTGTATATCTTTCTTGAGCTTGTAACAAAGGGTTCCCTTAGAAGCCTCTATCAGAAGTATACTCTTCGAGATTCCCAAGTATCTGCCTATACGAGACAGATTTTGCATGGTTTGAAGTATCTTCATGATCGAAATGTGGTTCACAGGGATATTAAATGTGCAAATATATTGGTGGATGCAAGTGGATCTGTCAAGCTTGCAGATTTTGGATTGGCAAAGGCAACCAAATTGAATGACGTTAAATCAATGAAGGGGACAGCATTCTGGATGGCGCCTGAGGTTGTAAAAGGAAAGAACAAGGGTTATGGGCTTCCAGCTGATATGTGGAGTCTGGGATGCACTGTACTGGAGATGTTAACAGGCCAACTTCCGTACCGTAATTTGGAATGTATGCAGGCCTTATTTAGAATTGGAAAAGGTGAGCCACCTCGTATTCCTGACTCTCTTTCAAGAGATGCACAAGATTTTATCCTGCAGTGCCTTCAAGTTAATCCAAATGATCGTCCCACTGCTGCTCAACTTTTAAACCATTCATTTGTTCAAAGGCCACTTTCTCAGTCCTCTGGTTCTTCATTTCCTCATATTCATGGCCGGAAGGGTTAG 1701 0.4844 MHHLSRIFEHRKQTKAMDHKNPRRKPKLERRNALKYSSEYDAGSSNSDDTLYTRSMEFYDRTSFRIEGVEGEFDRICRSLGLSGPEDFAIPAAAWEAMKFRSSSDILPRLKLDNLDIPEEEEEEEEEGEEHEERIVKSEEEGELSENHGDIVRVREIDESSTGIKGVRPPMLKPPPGVRVQVVNDSACSTWDLFRDLAPLEEEELGATNPSSDEREVAEKEEGEVGGRVSPKREEVENGDNAARIAEIVAGLSESCSFSTSNEDDSSSSTTDPKSNNISPQGRIKRIITAGSWQKGEFLGGGSFGSVYEGISDDGFFFAVKEVSLLDQGTQGKQSVYQLEQEIALLSQFEHDNIVQYYGTEMDQSKLYIFLELVTKGSLRSLYQKYTLRDSQVSAYTRQILHGLKYLHDRNVVHRDIKCANILVDASGSVKLADFGLAKATKLNDVKSMKGTAFWMAPEVVKGKNKGYGLPADMWSLGCTVLEMLTGQLPYRNLECMQALFRIGKGEPPRIPDSLSRDAQDFILQCLQVNPNDRPTAAQLLNHSFVQRPLSQSSGSSFPHIHGRKG 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0257 566 MobiDBLite consensus disorder prediction 202 241 - -
Aed10g0257 566 MobiDBLite consensus disorder prediction 116 147 - -
Aed10g0257 566 MobiDBLite consensus disorder prediction 10 49 - -
Aed10g0257 566 Coils Coil 121 141 - -
Aed10g0257 566 MobiDBLite consensus disorder prediction 256 281 - -
Aed10g0257 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Aed10g0257 566 ProSiteProfiles Protein kinase domain profile. 293 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0257 566 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 559 - -
Aed10g0257 566 Gene3D Transferase(Phosphotransferase) domain 1 291 561 - -
Aed10g0257 566 SUPERFAMILY Protein kinase-like (PK-like) 290 549 IPR011009 -
Aed10g0257 566 SMART serkin_6 293 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0257 566 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Aed10g0257 566 Pfam Protein kinase domain 294 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0257 566 MobiDBLite consensus disorder prediction 131 147 - -
Aed10g0257 566 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 59 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0257 Aed-Chr10 2074164 2080682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0257 4 550 MAP Kinase Kinase Kinase AT4G08500 48.689 1.74e-166 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed10g0257 Pkinase 1.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0257 K13414 - gmx:100819999 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1607 3 20619351 20627300 Aed10g0257 10 2074164 2080682 PCT