Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0244 ATGAGCAATCTCAGAACCCTATGTAGACCTCAGACCGTGTTCTCTTTCATTAGTTGCAGGCACCAATTTCGATCTAGGGTTTCGTTTCGAAACCCTAATTGCAGGCCCCGTTTGCCGTCGCCGTTTCTGTATTCTACAATCGGTTACTGGGGTTCGAATCCTTGGTTTAGCGTGAACCAGAAGAGAACTGTGGCCAAGGCAACTAACTGGGCCGAACAAAAATCCCCATATGAAACTCTTGAATTGGAAGGAGATGCTGATGACGACCAGATAAAGAATGCTTACAGACGCTTGGCCAAATATTATCATCCAGATGTCTATGATGGCAGAGGAACCCTTGAAGAAGGTGAAACAGCAGAAGCTAGATTCATCAAGATTCAAGCTGCTTATGAATTGCTTATAGATGGGGAGAGGCGAAGACAGTATGATATAGATAACAGGGTCAACCCTATGAAGGCATCTCAGGCATGGATGGAATGGCTTATAAAAAAGAGAAAAGCTTTCGATCAGCGGGGTGATATGGCAATTGCTGCTTGGGCTGAGCAGCAACAGCGCGAGTTAAATCTTCGTGTGCGTCAACTTTCTCGTTCAAAGATTGATCCAGATGAAACAAGGAGGATTCTGGCAAGAGAAAAGAAGGCTTCGGCAGAATATTACTCAAATACCCTTAAAAGGCACACCCTAATACTGAAGAAACGAGATTTGATGCGCAGAAAGGCCGAGGAAGAAAAGAAGAAGGCTATCAGCCGGCTCTTGGCAGCAGAAGGTCTTGAGCTTGATGATGATTCAGATACTGATGAATGA 804 0.4478 MSNLRTLCRPQTVFSFISCRHQFRSRVSFRNPNCRPRLPSPFLYSTIGYWGSNPWFSVNQKRTVAKATNWAEQKSPYETLELEGDADDDQIKNAYRRLAKYYHPDVYDGRGTLEEGETAEARFIKIQAAYELLIDGERRRQYDIDNRVNPMKASQAWMEWLIKKRKAFDQRGDMAIAAWAEQQQRELNLRVRQLSRSKIDPDETRRILAREKKASAEYYSNTLKRHTLILKKRDLMRRKAEEEKKKAISRLLAAEGLELDDDSDTDE 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0244 267 CDD DnaJ 76 135 IPR001623 -
Aed10g0244 267 SUPERFAMILY Chaperone J-domain 32 142 IPR036869 -
Aed10g0244 267 PANTHER LD30543P 57 266 - -
Aed10g0244 267 ProSiteProfiles dnaJ domain profile. 75 146 IPR001623 -
Aed10g0244 267 Coils Coil 237 257 - -
Aed10g0244 267 Pfam DnaJ domain 76 143 IPR001623 -
Aed10g0244 267 PRINTS DnaJ domain signature 95 110 IPR001623 -
Aed10g0244 267 PRINTS DnaJ domain signature 77 95 IPR001623 -
Aed10g0244 267 PRINTS DnaJ domain signature 118 138 IPR001623 -
Aed10g0244 267 PRINTS DnaJ domain signature 164 183 IPR001623 -
Aed10g0244 267 SMART dnaj_3 74 138 IPR001623 -
Aed10g0244 267 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Aed10g0244 267 Gene3D DnaJ domain 60 161 IPR036869 -
Aed10g0244 267 PANTHER CO-CHAPERONE PROTEIN DJLA 57 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0244 Aed-Chr10 1983294 1987820 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0244 67 143 C2H2 Transcription Factor Family AT1G74250 36.364 5.42e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0244 - - gmx:100808285 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0244 10 1983294 1987820 Aed10g0244 10 1983294 1987820 ECH