Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0231 ATGAGTTCAGTTCCCAGTATGAGAGTACTCAACGAGCAACAAGAGCACTTTCATGTTGAGGATACTAGTGAAGTAGAGAGGTCCCTTTGGGTGCTGAATCCCCCTAATCCACCACCTCTATGGAACAAGCTATTTAGTCCACTGAAGAAAACTTTCTCCTTTTTTTCATCAAAGAACAAAACTTGCCTTGGACATTCTGTTTCATTCTTGGAGGGTCTATTCCCAATCCTTAGCTGGTTCAAAAACTACAAAGCCTCCAAGTTCAAAGAGGATTTGCTAGCAGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGTATAGGATATGCTAATTTGGCAAAACTTCAGCCTCAATATGGCCTATACACCAGTGTTGTTCCTCCTCTTATCTATGCTGTGATGGGGAGTTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCATTGCTGCTATCCTCTCTTGTCCCCAAAGTGGTAGATCCTGCTGTTGATCCTGATGCATACAGGAATGTTGTCTTTACTGTTACCTTATTTGCTGGAATCTTTCAAGCTGCATTTGGTGTTTTAAGGTTGGGGTTTCTTGTGGATTTTCTTTCACATGCTGCACTTGTTGGATTCATGGCAGGCGCAGCCATCATTATTGGTCTTCAGCAGCTTAAGGGGTTGCTGGGGATCACTCACTTTACCAACAAAACTGATGTAATATCAGTGTTGGAATCTGTTTATAAGTCACTCCATCAACAAATTACATCTGGAGAAAAATGGTACCCTCTGAATTTTGTCATCGGGTGTTCATTCCTGATTTTCCTTTTAATAGCACGATTTGTTGGCAGAAGAAACAAAAAACTTTTCTGGTTGCCTGCTATTGCTCCTCTTCTATCAGTCATATTATCAACTTTAATTGTGTATTTGTCAAAAGCTGATAAGGATGGGGTTAATATAATAAAGCACGTCAAAAGAGGCTTGAATCCAAGTTCAGCTCACCAGTTACAATTCCATGGTCAACATGTTGGACAAGCAGCAAAAATTGGATTGATCTCTGCCGTTATTGCTCTTACTGAAGCAATAGCAGTTGGTCGATCTTTTGCTTCTATTAAGGGATACCATCTTGATGGCAACAAAGAAATGTTAGCAATGGGATGTATGAACATTGCAGGATCTCTCTCTTCATGCTATGTGGCAACTGGTTCATTCTCAAGGACTGCAGTAAATTTCAGTGCAGGATGTCAATCATCAGTATCAAATATTGTGATGGCAGTTACTGTGATTCTGTGTCTTGAATTGTTTACAAGGCTTCTATACTACACTCCTGTGGCCATACTTGCTTCTATCATCCTCTCAGCACTTCCTGGATTAATTAACATAAGTGAAGCTTTCTATATTTGGAAGGTTGACAAGTTTGACTTTCTTGCCTGCATTGGTGCTTTCTTTGGGGTATTGTTTGTATCAGTGGAAATTGGCCTTCTTGTTGCAGTGTCAATCTCGTTTGCAAAGATACTAATACAATCAATTCGACCTGGGATAGAAGTTCTAGGTAGAGTTCCAAGAACAGAAGCATTCTGCGATGTTAGTCAATATCCCATGGCCATAAGTACTCCAGGCATGTTGGTCATTCGCATAAGCTCTGGCTCACTCTGCTTTGCAAATGCTAATTTTGTTAGAGAAAGGCAAGCACTTCAACATTATTGGGTCACGGAAGAAGAAAATGAGCTTGCCAAGGGAAGGGTCCAAGCAGTTATCTTAGACATGAGCAACCTGATGAATGTTGATACTTCCGGGATTCTAGTACTGGAAGAACTGCACAAGAGGTTGCTTTCGCGTGGCGTACAATTGGCTATGGTGAACCCAAGGTGGCTAGTGATTCACAAGCTGAAAGTGGCACACTTTGTGGATAAAATCGGAAAGGAATGGGTTTTGCTTACTGTTGCTGAAGCAGTGGATGCATGTCTATCTTCTAAACTCCCCGAACCATGA 1977 0.4138 MSSVPSMRVLNEQQEHFHVEDTSEVERSLWVLNPPNPPPLWNKLFSPLKKTFSFFSSKNKTCLGHSVSFLEGLFPILSWFKNYKASKFKEDLLAGLTLASLSIPQSIGYANLAKLQPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLVPKVVDPAVDPDAYRNVVFTVTLFAGIFQAAFGVLRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTNKTDVISVLESVYKSLHQQITSGEKWYPLNFVIGCSFLIFLLIARFVGRRNKKLFWLPAIAPLLSVILSTLIVYLSKADKDGVNIIKHVKRGLNPSSAHQLQFHGQHVGQAAKIGLISAVIALTEAIAVGRSFASIKGYHLDGNKEMLAMGCMNIAGSLSSCYVATGSFSRTAVNFSAGCQSSVSNIVMAVTVILCLELFTRLLYYTPVAILASIILSALPGLINISEAFYIWKVDKFDFLACIGAFFGVLFVSVEIGLLVAVSISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMAISTPGMLVIRISSGSLCFANANFVRERQALQHYWVTEEENELAKGRVQAVILDMSNLMNVDTSGILVLEELHKRLLSRGVQLAMVNPRWLVIHKLKVAHFVDKIGKEWVLLTVAEAVDACLSSKLPEP 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0231 658 PANTHER SLC26A/SULP TRANSPORTER-RELATED 16 656 - -
Aed10g0231 658 ProSiteProfiles STAS domain profile. 543 650 IPR002645 -
Aed10g0231 658 SUPERFAMILY SpoIIaa-like 533 650 IPR036513 -
Aed10g0231 658 Pfam STAS domain 527 646 IPR002645 -
Aed10g0231 658 CDD STAS_SulP_like_sulfate_transporter 527 643 - -
Aed10g0231 658 TIGRFAM sulP: sulfate permease 75 646 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed10g0231 658 Pfam Sulfate permease family 88 474 IPR011547 GO:0016021
Aed10g0231 658 Gene3D STAS domain 506 653 IPR036513 -
Aed10g0231 658 PANTHER SULFATE TRANSPORTER 16 656 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed10g0231 658 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0231 Aed-Chr10 1874887 1879654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0231 10 648 Inorganic Solute Cotransporters AT1G77990 63.833 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0231 K17469 - gmx:100805269 1126.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0231 10 1874887 1879654 Aed10g0231 10 1874887 1879654 ECH
Aed3g1630 3 20878525 20885211 Aed10g0231 10 1874887 1879654 PCT