Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0230 ATGTCTTCAATGGGTCCTCCTGCTAATGAAAACATTGAAACAAAAGAGATGGATCTCAGAAGTATGTCATCTTCCTCACTTGGTACTCAGGCACCACAACAAGCACACAAAGTGGCAATTCCTCCAAGACAGAACCTCTTCAAGGAATTCCAAGCCACTATAAAAGAAACATTCTTTTCTGATGATCCTCTAAGACCCTTCAAAGATCAACCTAAATCAAGGAAGATCAGGCTTGGTATTGAGGCCATATTCCCAATACTTAGTTGGGGGAGAACTTACAACCTTAAGAAATTCAGAGGAGATTTAATATCTGGTCTCACTATTGCAAGTCTTTGCATTCCTCAGGATATTGGATATGCCAAGCTTGCACATTTGACTCCACAGTATGGACTGTACTCTAGTTTTGTTCCACCACTGATTTATGCTGTCATGGGTAGCTCTCGTGATATTGCTATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACCTTACTTAGTAACGAGATTGATCCTAATACACATCCAAAAGAATATCAGCGACTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACTCAAGCAACACTTGGTATTCTTAGGTTAGGATTCTTGATTGATTTCCTATCCCATGCTGCTATTGTTGGTTTTATGGGGGGTGCTGCTATCACAATTTCCCTTCAACAGCTTAAGGGTTTCCTCGGCATTAAAACTAAAAAGTTCACAACGGAGACTGATATAGTCCATGTGATGCATTCAGTATTCAAAGAAGCCCATCATGGATGGAACTGGCAAACTATAGTCATCGGAGCTAGCTTTTTGGGATTTCTTCTTGTTGCTAAATATATTGGAAAGAAAAACAATAAATTCTTCTGGGTGCCAGCAATTGCTCCATTGATATCCGTTATTTTGTCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGAAATTGTAAGAAATATAGAAAAAGGCATCAATCCTCCATCTGTTAAAGACCTTTATTTTAGCGGAGAAAACCTTGGAAAAGCTTTTAAAATTGGCATCGTGGCTGGCATGATAGCATTGACTGAAGCCACAGCAATTGGAAGAACGTTTGCATCTATGAAGGACTATCAATTGGATGGAAACAAGGAAATGGTGGCCTTAGGAACAATGAATGTTGTTGGTTCCATGACTTCGTGTTATGTAGCAACAGGTTCTTTCTCTCGGTCAGCAGTAAATTACATGGCAGGGTGCCAAACTGCAGTCTCTAATATTGTGATGTCAATAGTTGTGTTCTTAACCCTGGAATTCATCACTCCTCTTTTCAAGTACACTCCAAATGCCATTCTTGCTGCCATCATCATTTCTGCTGTCATCGGCCTTATAGACTATGAGGCAGCAATTTTGATTTGGAAGATAGATAAATTTGATTTTGTTGCTTGCATGGGTGCATTCTTTGGGGTTGTTTTTATCTCGGTTGAGATAGGACTTCTAATTGCTGTCGCAATTTCCTTTGCAAAGATCCTATTACAAGTGACAAGGCCCCGAACTGCTATTCTGGGGAAGATTCCTAGGACTACTGTCTATAGAAACATTCAACAATATCCAGAAGCTAGTAAGACTCCAGGTGTCATGATTGTAAGAGTCGATTCTGCAGTATATTTTTCCAACTCCAATTATGTTAAAGAAAGGACATTAAGATGGCTGATGGATGAAGAAGAAGAAGTGAAAGGAGAGTACCGCACAAAAATACAGTTTTTGATAGTTGAAATGTCACCCGTTACCGACATAGATACAAGTGGCATCCAAGCCTTTGAAGAGTTACACAAAAGTCTTGAGAAGAAGGGCGTTGAGCTTGTTCTGGCAAATCCTGGGCCAGCAGTGACAGACAAGCTTTATGCGTCCAGTTTTGTAAACACGATTGGCGAGGAGAAGATCTTCCTCACTGTTGCAGACGCTGTTGCATATTGTTCTCCAAAGGTGGTTGAGGACCCATGA 1992 0.4056 MSSMGPPANENIETKEMDLRSMSSSSLGTQAPQQAHKVAIPPRQNLFKEFQATIKETFFSDDPLRPFKDQPKSRKIRLGIEAIFPILSWGRTYNLKKFRGDLISGLTIASLCIPQDIGYAKLAHLTPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLSNEIDPNTHPKEYQRLAFTATFFAGITQATLGILRLGFLIDFLSHAAIVGFMGGAAITISLQQLKGFLGIKTKKFTTETDIVHVMHSVFKEAHHGWNWQTIVIGASFLGFLLVAKYIGKKNNKFFWVPAIAPLISVILSTFFVFITRADKQGVEIVRNIEKGINPPSVKDLYFSGENLGKAFKIGIVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLEFITPLFKYTPNAILAAIIISAVIGLIDYEAAILIWKIDKFDFVACMGAFFGVVFISVEIGLLIAVAISFAKILLQVTRPRTAILGKIPRTTVYRNIQQYPEASKTPGVMIVRVDSAVYFSNSNYVKERTLRWLMDEEEEVKGEYRTKIQFLIVEMSPVTDIDTSGIQAFEELHKSLEKKGVELVLANPGPAVTDKLYASSFVNTIGEEKIFLTVADAVAYCSPKVVEDP 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0230 663 MobiDBLite consensus disorder prediction 18 33 - -
Aed10g0230 663 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Aed10g0230 663 MobiDBLite consensus disorder prediction 1 36 - -
Aed10g0230 663 Pfam Sulfate permease family 98 480 IPR011547 GO:0016021
Aed10g0230 663 TIGRFAM sulP: sulfate permease 85 651 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed10g0230 663 Pfam STAS domain 533 651 IPR002645 -
Aed10g0230 663 CDD STAS_SulP_like_sulfate_transporter 533 648 - -
Aed10g0230 663 Gene3D STAS domain 512 659 IPR036513 -
Aed10g0230 663 PANTHER SULFATE TRANSPORTER 13 663 IPR001902 GO:0015301|GO:0016020|GO:0055085
Aed10g0230 663 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 13 663 - -
Aed10g0230 663 ProSiteProfiles STAS domain profile. 532 655 IPR002645 -
Aed10g0230 663 SUPERFAMILY SpoIIaa-like 534 656 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0230 Aed-Chr10 1855810 1862184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0230 1 662 Inorganic Solute Cotransporters AT1G22150 71.664 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0230 K17470 - gmx:100804208 1202.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0230 10 1855810 1862184 Aed10g0230 10 1855810 1862184 ECH
Aed3g1631 3 20891867 20898794 Aed10g0230 10 1855810 1862184 PCT