Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0218 ATGATGACGAACCAAAATGTGGTGACTCATGAGGTCATTAACACTCTGATTGCAGTGGCAGCAGCGTCCATTTCAAATTCAACTGTGTTGCCAAGTGCAACAGTGCCAGAATCCATGGCTGTGCTTGGTGGCTTTTGGGGCCTGCCCCATAAAAATCTTGTCAAAAAATTGGAAGGAGCTAAAGTTAGTGCTTGGATTGATTCAATGAGAGCTTCCTCCCCAACTCGTGCCAAATCAGAAACCCAAGAAAAAAGATCTTGGATTCTTTATCACCCTTCAGCTCTGAACACCTTTGAGCAAATAACATATAGTTCCAAAGGAAAACAAATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCCCCAATTGTTGCAGATCCGGATAAGGCTTTCATGACTAGAAAGATGAGAGCAACGCTAAAGGGTATAGCAAGGTATTTTCCCACAGCAATCGTGACTGGAAGGTGCAGAGACAAGGTATATAACTTTGTAAAATTGGCAGAACTTTACTATGCCGGAAGCCATGGCATGGACATCAAGGGTCCAACAAAAAGCCAAAGTCTAAAGCAAGGTAATGATAAAACAGTGCTGTTCCAACCCGCGAGTCAATTCTTGCCTATGATCGATGAGGTGTACAAGATCTTGTTAGAAAAAACAAAGACTGTCCCAGGGGCTAAGGTTGAGAACAATAAGTTTTGCTTATCCGTGCACTTTCGTTGTGTTGACGAAAAGAGTTGGGCAGCGTTGGCCGAGAAAGTTAGATTGGTTCTCAATGAGTATCCACAACTAACGCTAACCCAAGGGAGAAAAGTGCTAGAAATCCGATACGAGAATTCGAATGATGTATTTCCAATCTATATTGGTGATGATCGAACTGATGAGGATGCTTTTAAGGTTTTGCGCAGTAGGGGTCAAGGAATCGGGATTCTTGTTGAGCAATTCTTGCGGCGTTTAGTGGAGTGGAAAAGATCGAGTACTAGTGTGACTCCCACAAGTGTATAG 1002 0.4281 MMTNQNVVTHEVINTLIAVAAASISNSTVLPSATVPESMAVLGGFWGLPHKNLVKKLEGAKVSAWIDSMRASSPTRAKSETQEKRSWILYHPSALNTFEQITYSSKGKQIVVFLDYDGTLSPIVADPDKAFMTRKMRATLKGIARYFPTAIVTGRCRDKVYNFVKLAELYYAGSHGMDIKGPTKSQSLKQGNDKTVLFQPASQFLPMIDEVYKILLEKTKTVPGAKVENNKFCLSVHFRCVDEKSWAALAEKVRLVLNEYPQLTLTQGRKVLEIRYENSNDVFPIYIGDDRTDEDAFKVLRSRGQGIGILVEQFLRRLVEWKRSSTSVTPTSV 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0218 333 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 2 314 IPR044651 GO:0004805|GO:0005992
Aed10g0218 333 Gene3D - 112 312 IPR023214 -
Aed10g0218 333 SUPERFAMILY HAD-like 111 314 IPR036412 -
Aed10g0218 333 Pfam Trehalose-phosphatase 276 313 IPR003337 GO:0003824|GO:0005992
Aed10g0218 333 Pfam Trehalose-phosphatase 113 275 IPR003337 GO:0003824|GO:0005992
Aed10g0218 333 Gene3D - 192 277 - -
Aed10g0218 333 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 2 314 - -
Aed10g0218 333 TIGRFAM T6PP: trehalose-phosphatase 108 278 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0218 Aed-Chr10 1754505 1757307 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0218 K01087 - gmx:100788641 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0218 10 1754505 1757307 Aed10g0218 10 1754505 1757307 ECH
Aed3g1643 3 21032255 21035153 Aed10g0218 10 1754505 1757307 PCT