Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0202 ATGGCTCCTAGAACTGAGAGGCTCTATTTGTTTGATAGGGGGGCTGTTAATGTAATGAATGTGACTTCGTTGTGCAAATGTGCAATCAAATACTTATCCTCCCTTCTATGTATGTCACCTAAACTGGCAGGACTATTCAATTTCTCTGTGTTGGTTGCTTTACAGCTTGTAGCAGCACGTTCTTCATCCAGCATTGGTAAGGGGAAAAATCATGAAGGCTCAATAAAGTACGGTTTCAGCCTTGTAAAAGGGAAAGCTAATCACCCAATGGAGGATTATCATGTTGCCAAGTTTGCACAGATAAAGGATAATGAATTGGGGTTATTTGCTATTTACGATGGTCACTTGGGTGACCGTGTGCCTGCCTACTTGCAGAAACATTTGTTTACCAACATTTTGAGGGAGGAGGAATTTTGGGAGGACCCGACTCTTTCTATCTCGAAAGCATACGAGAGCACAGATCAAGAAATTCTATCACACAGTTCTGATCTTGGGCATGGTGGATCAACAGCCGTAACTGCTATATTGATCAATGGACAAAGGTTATGGATAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCTGTACAAATGACTACAGACCATGAGCCTAACATGGAACGAGGCAGCATTGAGACTAGAGGTGGTTTTGTCTCTAACTTGCCAGGTGATGTGCCTAGAGTAAATGGACAACTTGCTGTTTCTCGTGCATTCGGAGACAAGAGTCTCAAGTCACATTTGCGATCAGACCCTGATGTACAGAATACTGACATAGATGTTGATACTGAGATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGACTAATCAAGAGGCAGTGGATATTGCTAAAAGAACGAGAGACCCACAGAAAGCAGCTAAGCAACTAACAGCTGAGGCATTAAAAAGAGATAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGATGA 975 0.4174 MAPRTERLYLFDRGAVNVMNVTSLCKCAIKYLSSLLCMSPKLAGLFNFSVLVALQLVAARSSSSIGKGKNHEGSIKYGFSLVKGKANHPMEDYHVAKFAQIKDNELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWEDPTLSISKAYESTDQEILSHSSDLGHGGSTAVTAILINGQRLWIANVGDSRAVLSRKGQAVQMTTDHEPNMERGSIETRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNTDIDVDTEILILASDGLWKVMTNQEAVDIAKRTRDPQKAAKQLTAEALKRDSKDDISCVVVKFR 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0202 324 SMART PP2C_4 72 321 IPR001932 -
Aed10g0202 324 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 53 323 - -
Aed10g0202 324 PANTHER PROTEIN PHOSPHATASE 2C 53 323 IPR015655 GO:0004722|GO:0006470
Aed10g0202 324 CDD PP2Cc 75 323 IPR001932 -
Aed10g0202 324 Pfam Protein phosphatase 2C 85 316 IPR001932 -
Aed10g0202 324 Gene3D - 71 324 IPR036457 -
Aed10g0202 324 ProSiteProfiles PPM-type phosphatase domain profile. 76 323 IPR001932 -
Aed10g0202 324 SUPERFAMILY PP2C-like 74 323 IPR036457 -
Aed10g0202 324 SMART PP2C_SIG_2 87 323 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0202 Aed-Chr10 1608294 1612097 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0202 72 324 PP2C-type Phosphatase Gene Family AT1G22280 75.290 4.03e-146 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0202 K17506 - gmx:100797292 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0202 10 1608294 1612097 Aed10g0202 10 1608294 1612097 ECH