Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0188 ATGGAGTCTCAGAGTGAGAGAGATCGCCGGACAGATGCTCTCGGAGACCTTCGAGTCCTCCCCGACGAAATCCTCTGCTCTATTTTGGAACGTCTCACTCCCCGAGATGCTGCTCGCGTCGCTTGCGTTAGCAGTGTGATGTACATACTGTGCAATGAAGAACCACTGTGGATGAGTCTATGCCTAAAAGGAGCATCTGGTTTGCTTCAATACAAAGGCTCTTGGAAGAAAACTGCGCTGCATAATGAGAATCTGCCAGACAAATACAAAGAATACCATCGAGGGCCTTTATATTTTGATGGGTTCAACTCTTTATTTTTGTACAGGAGGTTATACCGCAGTCATACCACATTGGAAGCATTTTATGCGGATACTGGAAATGTGGAAAGAATAAAAGACATCTCACTGAAGGACTTCTATAATGAGTATGATGCAAAGAAACCGGTTATGCTCACTGGATTGGCTGATACATGGCCCGCCAGGCATAAATGGACAACTGATCAGCTGTTGCTAAACTATGGAGATATAGTATTTAAAATTTCTCAAAGGAGTTTCCAGAAGGTCTCCATGAAGTTCAAGGATTATGTCTCTTACATGAAAGTTCAGCATGATGAAGATCCCTTGTATATTTTTGATGAAAAGTTTGGGGAAGCTGCACCTAGCTTATTGAAGGATTATAGTGTGCCTCATCTTTTTCAAGAAGACTTCTTTGATATCTTAGATACAGATAAACGACCATCTTATAGGTGGTTCATAATTGGACCAGAGAGATCTGGTGCCTCTTGGCATGTTGATCCAGCTCTTACCAGTGCATGGAATACTCTTCTTTGTGGCCGTGGGCACTATATCCTCCCGGGAGTACCTTTGGGTGTGACGGTGCATGTTAATGAAGAAGATGGTGATGTCAATGTCGAGACTCCATCATCACTGCAGTGTACACAACTGCCTGGAGAAACAATTTATGTTCCTAGTGGATGGTGGCACTGTGTGCTAAATTTGGAAACAACTATTGCTGTCACGCAAAACTTTGTGAATTCCAACAACTTTGAATTTGTATGTTTGGATATGGCACCTGGTTATCGTCATAAAGGAGTTTGCCGTGTTGGGTTGCTTGCTCTTGATGAAGATAGTTATGAAAATGTCAGACAGAATGTGTCATGCAATGAAAAGGGCTCGAGTTACTCTGATTTGTCAAGGAAAGAGAAAAGAGCCAAAACTCAGAAAGATGTAGATGATCTATATTACGAAAGAGCCATGGATGGTGTATCTAGAAGCTACAATTTATGGAAAGATGGTTTTTCCTATGATACAAACTTCTTATCAAAGTTTTTGGATAAAGACAGAGACCACTACAGTTCCCTGTGGAGCTCAGGCAACAGCATGGGTCAACGGGAACTAAGAGAATGGTTATCCAAGCTCTGGATTCAAAAACAAAAAATCAGAGAGCTGATATGGAAGGGAGCATGTATTGCACTAAATGCCAACAAGTGGTTAGAATGCCTATCAAAAATTTGTGCCTTTCATAATTTACCCCCTCCCACGGACGATGAAAGGCTACCAGTTGGTTCGGGTAGCAATCCTGTTTATTTAGTGGGAAACTCTGTTGTTAAGATTTTTGTTGAAGGAGGACTGGAAGCTTCGCTTTATGGTTTAGGGACAGAGCTAGAGTTTTACAGTCTCTTGAATGAAGCCAACTCCCCTATCAGTAAACACATTCCTAATGTTTTGGCCAGTGGAATTATTTATCTTGAAAATGGATCTTATACCAATTTAAGTTGGGATGGAGAAGGAGTCCCTGATGTCATTGTGAAAAACAATCTGATCAGGAAGAAATGCAGCATTGATGGTTTCTCATTTGGGGTATGGGGCAAGAAACAGTTGGAGTATAGGAATGCTGGGTTGCCGGTGGATGCATCAGTTAGCTTAGCTGGTAACTCAAGCATATGGCCATATATGATAACAAAACGATGTGATGGGAATATGTTTGCAGAATTAAGAGACAGACTAACATGGGAAGATACAACAAACTTAGCCTCCTTCTTGGGGGAGCAGCTGCGCCACCTTCATCTTTTATCATATCCACCTTTAAATATTTCATCTTTCTCTGATATTGAACATGAATTAAGCTTGGTTGAGGCTAATGGTTGTGTTGCAACTGTTAACTGTAAATCAAACGCTGCAGCAGAATGGAGGCTCTTCACCAGAACCTTAACAAAGATGAGGAAGGATGTGTCAAGCCGTTTGACCAAGGGAGATCCAATTCCTAGCAAACTGATAGAGAAGATTGATGAATATATCCCACCTGATTTTGCTGAGCTGCTAAATATAACCGAGAATTTTGGAAATGGTACTTGCAAACCTTGCTCCTGGATACACACTGACATTATGGATGATAACATTTACATGAAACCATCACCGGTTTGCTCTACCACCAATGGGAATACTGAAGATACCACCATTGTGGACAATGGTTTGTTGAGTAATGATGAAGTAAAATCATGGTGTCCCAGTCATATTCTTGATTTTAGTGATCTTTCAATAGGTGATCCCCTTGTTGACTTGATACCAATTTATTTAGATGTGTTTAGAGGTGATTCTCATCTCCTTAAGAAGTTTTTAGAAAGTTACAAGCTTCCTTTTGCTAGTAACATATCAGGGTATGAGTCCTCAGAGGGTGATAAAAAGTTTGGCCGAATTTCATATGTTGCTATGTGCTATTGTATCTTGCATGATGACAATGTCTTGGGAGCTCTTTTTAGCATATGGGAAGAACTGAGATCAGCAAAGTCATGGGAAGAAGTTGAACTGATAGTGTGGGGGGAATTGAATAATTACAAAGGCTTTCCGTGA 2850 0.4088 MESQSERDRRTDALGDLRVLPDEILCSILERLTPRDAARVACVSSVMYILCNEEPLWMSLCLKGASGLLQYKGSWKKTALHNENLPDKYKEYHRGPLYFDGFNSLFLYRRLYRSHTTLEAFYADTGNVERIKDISLKDFYNEYDAKKPVMLTGLADTWPARHKWTTDQLLLNYGDIVFKISQRSFQKVSMKFKDYVSYMKVQHDEDPLYIFDEKFGEAAPSLLKDYSVPHLFQEDFFDILDTDKRPSYRWFIIGPERSGASWHVDPALTSAWNTLLCGRGHYILPGVPLGVTVHVNEEDGDVNVETPSSLQCTQLPGETIYVPSGWWHCVLNLETTIAVTQNFVNSNNFEFVCLDMAPGYRHKGVCRVGLLALDEDSYENVRQNVSCNEKGSSYSDLSRKEKRAKTQKDVDDLYYERAMDGVSRSYNLWKDGFSYDTNFLSKFLDKDRDHYSSLWSSGNSMGQRELREWLSKLWIQKQKIRELIWKGACIALNANKWLECLSKICAFHNLPPPTDDERLPVGSGSNPVYLVGNSVVKIFVEGGLEASLYGLGTELEFYSLLNEANSPISKHIPNVLASGIIYLENGSYTNLSWDGEGVPDVIVKNNLIRKKCSIDGFSFGVWGKKQLEYRNAGLPVDASVSLAGNSSIWPYMITKRCDGNMFAELRDRLTWEDTTNLASFLGEQLRHLHLLSYPPLNISSFSDIEHELSLVEANGCVATVNCKSNAAAEWRLFTRTLTKMRKDVSSRLTKGDPIPSKLIEKIDEYIPPDFAELLNITENFGNGTCKPCSWIHTDIMDDNIYMKPSPVCSTTNGNTEDTTIVDNGLLSNDEVKSWCPSHILDFSDLSIGDPLVDLIPIYLDVFRGDSHLLKKFLESYKLPFASNISGYESSEGDKKFGRISYVAMCYCILHDDNVLGALFSIWEELRSAKSWEEVELIVWGELNNYKGFP 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0188 949 ProSiteProfiles F-box domain profile. 14 60 IPR001810 GO:0005515
Aed10g0188 949 SUPERFAMILY Protein kinase-like (PK-like) 649 879 IPR011009 -
Aed10g0188 949 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 3 882 - -
Aed10g0188 949 ProSiteProfiles JmjC domain profile. 217 360 IPR003347 -
Aed10g0188 949 Pfam F-box-like 19 63 IPR001810 GO:0005515
Aed10g0188 949 SMART cupin_9 217 355 IPR003347 -
Aed10g0188 949 SUPERFAMILY Clavaminate synthase-like 122 352 - -
Aed10g0188 949 PANTHER JMJC DOMAIN-CONTAINING PROTEIN 8 3 882 - -
Aed10g0188 949 SUPERFAMILY F-box domain 7 66 IPR036047 GO:0005515
Aed10g0188 949 Gene3D Cupin 109 345 - -
Aed10g0188 949 SMART fbox_2 20 60 IPR001810 GO:0005515
Aed10g0188 949 Pfam Cupin-like domain 145 347 IPR041667 -
Aed10g0188 949 Gene3D - 2 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0188 Aed-Chr10 1492174 1501190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0188 1 945 Glycosyltransferase AT1G78280 58.051 0.0 1129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Aed10g0188 F-box-like 1.3e-07 CL0271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0188 - - gmx:100792541 1803.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0188 10 1492174 1501190 Aed10g0188 10 1492174 1501190 ECH