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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Aed10g0174
ATGAGTACCACTCTCACTCTCCATCATGACCCTCCCCGCTTTCTCCGTTTTCTCTTCTATTTTTTTCTCCTCACACTCACACAGTTTCCGCCGCCGGCCACCGCGCAGCTCCCGAACACGCTGTCGCCTCCGCCGCCGCAAGAGGACCGGTTTTCGAGGCTGAAGTTCGACAAATCCATGGCCATCGTTCTGGTGATCCTGGTCGCGGTGTTCTTCGTCCTGGGATTCCTCTCCGTGTACACGCGCCAGTGCGCTGAGCGTAGGATGCGAGGAAGGTTCGACCTCTCCATCTCGATCTCGATCCCGCGCCGGCAACGCGGTTTGGACCGCGACATCATCGAAACGTTTCCGACGTTCGTGTACTCGACAGTGAAGAGCCGGAAAATAGGACTCGCCACGCTGGAATGCGCCGTGTGCCTGAACGAGTTCGAGGAGGACGAAACGCTGCGTTTGATCCCTAAGTGCAGTCACGTGTTCCACCCCGACTGCATCGACGCCTGGCTCGCTAATCACTCAACTTGCCCCGTCTGTCGCGCCAATCTTGTCCCCAAACCCGACGACCCGTCTTTTCTTCCCATCCAATTCCCGGATCCGGAACAGCAGCCCGTTTTAAATACATTGACCCGACCCGAAACTGATGACTCTCAGAAGGTTAATGATGATTTGATTAGTGAGACTGAGAACCGTATGCTGCCCTTGCGGTCAAGGTCAACGGGGCACTCGCTGGTTCAACCCGGGGAGAATTGCGAGAGGTTTACTCTGCATTTGCCTGAGGAAGTGCGGAACCAGCTGATGCTGAGTCGCACCAAGAGTTGCGGCGTGAACGTGACGTTCACGCGCGAGAACAGTGAAAGAAGAGGTTACAGGACTAGGAGCGTTGGTAGCACTGCTCCTCACGTGACGGGGTGGTTTTCTCGGACACGCTCGGTGAAGGATGATGTCGGGGAACGGTCTTCGGATCGGTTATTCTCTACGACCACGACAAGGGATAGTGAGGTTTAG
1002
0.5609
MSTTLTLHHDPPRFLRFLFYFFLLTLTQFPPPATAQLPNTLSPPPPQEDRFSRLKFDKSMAIVLVILVAVFFVLGFLSVYTRQCAERRMRGRFDLSISISIPRRQRGLDRDIIETFPTFVYSTVKSRKIGLATLECAVCLNEFEEDETLRLIPKCSHVFHPDCIDAWLANHSTCPVCRANLVPKPDDPSFLPIQFPDPEQQPVLNTLTRPETDDSQKVNDDLISETENRMLPLRSRSTGHSLVQPGENCERFTLHLPEEVRNQLMLSRTKSCGVNVTFTRENSERRGYRTRSVGSTAPHVTGWFSRTRSVKDDVGERSSDRLFSTTTTRDSEV
333
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Aed10g0174
333
SUPERFAMILY
RING/U-box
130
186
-
-
Aed10g0174
333
MobiDBLite
consensus disorder prediction
305
333
-
-
Aed10g0174
333
ProSiteProfiles
Zinc finger RING-type profile.
136
178
IPR001841
-
Aed10g0174
333
Gene3D
Zinc/RING finger domain, C3HC4 (zinc finger)
98
183
IPR013083
-
Aed10g0174
333
Pfam
Ring finger domain
135
178
IPR001841
-
Aed10g0174
333
SMART
ring_2
136
177
IPR001841
-
Aed10g0174
333
PANTHER
RING-H2 FINGER PROTEIN ATL11
12
275
-
-
Aed10g0174
333
MobiDBLite
consensus disorder prediction
197
216
-
-
Aed10g0174
333
PANTHER
RING FINGER DOMAIN-CONTAINING
12
275
-
-
Aed10g0174
333
CDD
RING-H2_PA-TM-RING
135
178
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Aed10g0174
Aed-Chr10
1381761
1382762
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Aed10g0174
14
287
Rapid Response to Elicitors
AT3G05200
42.525
1.83e-66
212
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Aed10g0174
K10664
-
gmx:100805815
457.603
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Aed10g0174
10
1381761
1382762
Aed10g0174
10
1381761
1382762
ECH
Aed3g1698
3
21632039
21633178
Aed10g0174
10
1381761
1382762
PCT
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