Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0165 ATGAGGAAGAAAAGGAAAGGAAGCGAGACTGATGCGTCTGGGGATCTGGCTGTTATTTTGGCTCCTAATCATGCCTCTGCTTCGTCAAATTTTAAGTCCCATTACTCGCTAGAGGATTGTTCTCGGCTGAAGAAGAGGTGTTGTAAGGAGGGGGATGCTGACACTGAGCCAGCTGCTTCCTTTAAAAGGAGGCTTGCTGGCATTGCTACTGCCCCGCCTTGTGGGATTTCATCTTTGATCACGCCAGGGAGAGGGCTCAAGAGGAAGATAGGTTGCATTGATGTTGCTACCCAGATGGGCAGGAAGAAGAAGATTGAGGATGATTATGTGTCTGGTGAGACTATTGGGCAAGGCAAGTTTGGGTCTGTTTGGTTGTGTCGGTCGAAGGTTAGTGGGGCAGAATATGCTTGTAAAACCCTGAAGAAGGGGGAGGAGACAGTTCACCGTGAGGTTGAGATCATGCAACACTTGTCTGGACATTCTGGGGTTGTGACACTGCAAGCAGTTTATGAGGAAACTGATTGCTTTCATCTTGTGATGGAATTATGCTCTGGGGGACGACTCATTGATCGGATGGTTAAGGATGGTCCATATTCAGAACAGCGGGCTGCTAATGTACTCAAGGAAGTGATGTTGGTCATCAAGTATTGTCATGACATGGGAGTTGTGCACAGAGATATCAAACCCGAGAATATTCTGCTCACGGCATCTGGAAAAATAAAGCTTGCAGATTTTGGCTTGGCCATGAGAATTTCAGAAGGTCAGAACTTGACTGGTTTGGCAGGAAGCCCTGCCTATGTTGCCCCAGAAGTATTGTTAGGCAGATACTCTGAGAAGGTGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGCAGTCTTCCATTTCAAGGAGATTCATTGGAAGCAGTTTTTGAGGCTATTAAGACAGTCAAGTTAGATTTCCAAAATGGAATGTGGGAATCAATATCTAAACCTGCACGAGACCTTATTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATATCGGCTGACGAAGTACTCAGTTGCCTGTTTTATCTTTCTTCCTCTCTGCAGGATGAATGCACCCCAGATTGTTGTATAACTCTCTCTCCCCCCATAGGGCACCCATGGATATTGTTCTACACGGCACGTTCATTGCCGATGCTGCCCATCAAAACAAAATTGAAGAACCAAATTGGTTCCGCATGCCAACCTCTTGTTGCTGTTCCTGAACCAGGGTTAGGAGTAAATAGAATAGGTAATTACTCACTTAGCGAGGGTTCATCATCCTCTGAAAGTTGCAACAACTCAGATGATGATCAGGATGAATGTGTGTTGATTGATGTGCTTGCCTCTGCAATTTCACACGTGAGGATATCTGAACCAAAGAGGAGCAGGGTGTGTGGTCCCACGGGTCCGATAGTTCAACAAGGTTCATCTAACATGAAGCCTAACAACCTCTGTAAAGCATTTTGA 1491 0.4601 MRKKRKGSETDASGDLAVILAPNHASASSNFKSHYSLEDCSRLKKRCCKEGDADTEPAASFKRRLAGIATAPPCGISSLITPGRGLKRKIGCIDVATQMGRKKKIEDDYVSGETIGQGKFGSVWLCRSKVSGAEYACKTLKKGEETVHREVEIMQHLSGHSGVVTLQAVYEETDCFHLVMELCSGGRLIDRMVKDGPYSEQRAANVLKEVMLVIKYCHDMGVVHRDIKPENILLTASGKIKLADFGLAMRISEGQNLTGLAGSPAYVAPEVLLGRYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKTVKLDFQNGMWESISKPARDLIGRMLTRDISARISADEVLSCLFYLSSSLQDECTPDCCITLSPPIGHPWILFYTARSLPMLPIKTKLKNQIGSACQPLVAVPEPGLGVNRIGNYSLSEGSSSSESCNNSDDDQDECVLIDVLASAISHVRISEPKRSRVCGPTGPIVQQGSSNMKPNNLCKAF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0165 496 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 379 488 - -
Aed10g0165 496 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 364 - -
Aed10g0165 496 PANTHER SERINE/THREONINE-PROTEIN KINASE 379 488 - -
Aed10g0165 496 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Aed10g0165 496 CDD STKc_CAMK 108 354 - -
Aed10g0165 496 ProSiteProfiles Protein kinase domain profile. 109 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0165 496 SMART serkin_6 109 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0165 496 Gene3D Transferase(Phosphotransferase) domain 1 100 372 - -
Aed10g0165 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Aed10g0165 496 PANTHER SERINE/THREONINE-PROTEIN KINASE PEPKR2 24 364 - -
Aed10g0165 496 SUPERFAMILY Protein kinase-like (PK-like) 106 412 IPR011009 -
Aed10g0165 496 Pfam Protein kinase domain 109 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0165 Aed-Chr10 1311684 1316095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0165 109 352 EF-hand Containing Proteins AT1G50700 45.276 2.82e-72 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed10g0165 Pkinase 4.7e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0165 - - gmx:100812729 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0165 10 1311684 1316095 Aed10g0165 10 1311684 1316095 ECH
Aed3g1705 3 21683262 21686687 Aed10g0165 10 1311684 1316095 PCT