Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0141 ATGTCAACAACACTGAACCATCTTTTTGATCTTCCTGAACAGATATGTTACATACAATGTGGATTCTGTACCACTATTTTAATGGTAAGTGTACCATGCAGCAGTTTGTCAATGGTGGTAACAGTAAGATGCGGGCACTGCACAAGCCTCCTTTCTGTTAACATGTTGAAAGCTTCTTTTGTCCCTTTGCACCTCTTAGCATCTCTTAGTCATCTTGAGCAAAAAGAAAGTAGTCCAGAAGAAGATGCTAACAAGAATTTTAACAGCCACAGTGCATCCATGATGACCTATTCTGATTGTGAGGAAGAGGATGTAATTCCAATGAGTAATATTGTGAATAAACCCCCAGAGAAGAGACAGCGAACACCATCAGCTTATAACTGCTTCATCAAGGAGGAGATTAAAAGGCTAAAGGCAGTAAACCCTGACATGGCCCACAAGGAAGCTTTTAGTACTGCTGCAAAAAATTGGGCCAATTTTCCACCAACTCAGTGGTGCAAAGGAGATGAAGAGAGCTCTAGCCAGAAAGATCAACTTGCGGATCATGGCTCCCAAGTGGACCCTCTTGATGCTGAGGTCAATGAAGAAGAAGGACAAGGTTTCCGTGGAAGAAAGGTTCCAAGGAATTCCATCTTGGAAAGGACACAATTTGAATGA 657 0.4201 MSTTLNHLFDLPEQICYIQCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVNMLKASFVPLHLLASLSHLEQKESSPEEDANKNFNSHSASMMTYSDCEEEDVIPMSNIVNKPPEKRQRTPSAYNCFIKEEIKRLKAVNPDMAHKEAFSTAAKNWANFPPTQWCKGDEESSSQKDQLADHGSQVDPLDAEVNEEEGQGFRGRKVPRNSILERTQFE 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0141 218 PANTHER AXIAL REGULATOR YABBY 4 1 178 - -
Aed10g0141 218 MobiDBLite consensus disorder prediction 195 211 - -
Aed10g0141 218 Gene3D High mobility group box domain 109 182 IPR036910 -
Aed10g0141 218 SUPERFAMILY HMG-box 110 163 IPR036910 -
Aed10g0141 218 MobiDBLite consensus disorder prediction 162 218 - -
Aed10g0141 218 Pfam YABBY protein 12 164 IPR006780 GO:0007275
Aed10g0141 218 PANTHER PROTEIN YABBY 6-RELATED 1 178 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0141 Aed-Chr10 1077981 1079897 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0141 1 218 C2C2-YABBY Transcription Factor Family AT1G23420 57.642 1.34e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aed10g0141 YABBY 3.9e-62 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0141 K25796 - gmx:100804172 387.882