Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0137 ATGATGTGCTCAACGCGTGACCTCGGACTTCACTTCACTTCAATTAGAAACTGTAGTTTTTGTCATATATTTCCACTTAGTTTTATTCGGTCATATAATGCTATAGCAGGAAAACCAAGTGTGATTCAATTGATCCCTGCCCTTGGTATCATTGGCTTTGCTGTTTTTGGTCTTGAGCCACTCCTACGCCTGAGCAGGAAACTATTTCTCCAAGAAAGGACTGATTGGAAGAAAAGTAGTTCACGTTATATTTTGACATCTTATTTTCAACCTTTGCTGCTGTGGACTGGGGTAATGCTCATCTGCAGGGATTTAGATCCACTAGTCCTGCCATCAGAAACCAGTCAAGCTATTAAGCAACGGCTGCTGAGTTTTGTACGCTTAATTCGACAAGCACACAAATTTTGTATGGAGACAAATGACTCCAGTGATGAAAGAAATATGAGCATTGATTTTACCGGGAAAGCTGTATATACTGCAATATGGGTAGCTGCTGTGTCATTGTTCATGGAGTTGCTGGGTTTCTCAACACAGAAGTGGTTGACTGCTGGTGGTTTGGGCACAGTATTGATTTCCCTTGCAGGTCGCGAGATATTTACAAACTTCCTTTCGAGTATAATGATTCATGCAACTCGGCCATTTGTTGTGAATGAGCGGATTCAAACAAAAATTAAAGGATATGAGGTTACTGGCTGGTGGTCTCCAACAATAGTTAGAGGTTCTGATTGTGAAGCAGTTCATATTCCTAATCACAATTTGAGTGTAAATGTTGTGAGAAATCTTAGTAAGAAATCTCATTGGCGCATCAAGACTCACCTTGCTATCAGTCACTTGGATGTTAACAAGATTAATAGTATTATAGCTGATATGCGCAAGGTTTTGGCCAAAAATCCTCAAGTAGAGCAGAACAAATTGCACAGAAGAGTTTTTCTAGAAAATATTGATCCAGAAAATCAGGCTCTTATGATATTAATATCCTGCTTTGTTAAAACTAAACATTCTGAAGAGTACCTCCGTGTAAAGGAGGCAATCCTATTGGATCTTCTCAGAGTTATCAGTCATCATCAAGCTCGGCTAGCCACACCTATCCGCACTGTTCAGAAAATGTGCAGTGACATTGATATAGATATTGATCCATTTGATGACACTACTTCCACTCGTTCAAAGAAAAACCGTCCTGTCCCACTGTTAGATCCACCTTATAAAGTTAAGCCTTCAACTACTACAAGTGAAGACAAAGATGCCAAGATTGATGAAACCTTGCCATCTGACTTCAAAGTAGAACGTGACAAATTTGCTGCGACATCGAGTTCAGTCCAGAAGACCTCCAAATCCCAGAAGCCTAAAAAGGAAAGAGCAGGTAAGGGAACAACATCCAATGAGTTTGGTTCTGGAGAGACTACTTCGCCATCAGATGAAGAGAAATCTGTTAGTCGTTCTTTTGAAGAGAATATTGTTCTTGATGCTGCCCTGCTGGGCTCAAAGAGAACTCTTGCAATGGATGAAGAATTGGTTCAATCTATTCCTGCAGAATCACATGAAGTTGCAGGCCATCAGAATGGGAGTGAACCTTCTATTTGCAAGGATAAGAAGGATGGTGAGATGTCTTCATTTCCTACTGCTAAACAAAAGGATTAG 1638 0.4029 MMCSTRDLGLHFTSIRNCSFCHIFPLSFIRSYNAIAGKPSVIQLIPALGIIGFAVFGLEPLLRLSRKLFLQERTDWKKSSSRYILTSYFQPLLLWTGVMLICRDLDPLVLPSETSQAIKQRLLSFVRLIRQAHKFCMETNDSSDERNMSIDFTGKAVYTAIWVAAVSLFMELLGFSTQKWLTAGGLGTVLISLAGREIFTNFLSSIMIHATRPFVVNERIQTKIKGYEVTGWWSPTIVRGSDCEAVHIPNHNLSVNVVRNLSKKSHWRIKTHLAISHLDVNKINSIIADMRKVLAKNPQVEQNKLHRRVFLENIDPENQALMILISCFVKTKHSEEYLRVKEAILLDLLRVISHHQARLATPIRTVQKMCSDIDIDIDPFDDTTSTRSKKNRPVPLLDPPYKVKPSTTTSEDKDAKIDETLPSDFKVERDKFAATSSSVQKTSKSQKPKKERAGKGTTSNEFGSGETTSPSDEEKSVSRSFEENIVLDAALLGSKRTLAMDEELVQSIPAESHEVAGHQNGSEPSICKDKKDGEMSSFPTAKQKD 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0137 545 Pfam Mechanosensitive ion channel 155 356 IPR006685 GO:0016020|GO:0055085
Aed10g0137 545 MobiDBLite consensus disorder prediction 509 545 - -
Aed10g0137 545 MobiDBLite consensus disorder prediction 457 471 - -
Aed10g0137 545 MobiDBLite consensus disorder prediction 380 481 - -
Aed10g0137 545 MobiDBLite consensus disorder prediction 407 431 - -
Aed10g0137 545 MobiDBLite consensus disorder prediction 524 545 - -
Aed10g0137 545 Gene3D - 120 212 - -
Aed10g0137 545 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 24 532 IPR045042 -
Aed10g0137 545 PANTHER MECHANOSENSITIVE ION CHANNEL-LIKE PROTEIN 24 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0137 Aed-Chr10 1038154 1051570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0137 28 503 Mechanosensitive Ion Channel Family AT1G58200 53.004 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0137 K22047 - gmx:100797302 902.508