Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0135 ATGAACACAAGCAGAGCCGAAGCGGAGCGGTTGCTCGCGATCGGCGAGAAGCTGCTGCAGAGCCGCGATCTGAACGGCTCGCGCGACTTCGCCATCCTCGCGCAGGAAGCCGAGCCGCTCCTGGAAGGCTCCGACCAGATCCTGGCCATCGTGGACGTCCTCCACGCCGCCGAAAAACCAATCAGCAGCAACGAGCACCACCTCGATTGGTACGCTGTTCTCCAACTCGACCGCACGTGCCAGGACCTCGATCTCATCAAAAGACAGTATCGCAGGCTCGGGCTCCTCCTCCACCCCGACAAGAACCTCTTCTCCCTCGCCGACCACGCCTTCAAGCTCGTCTCCGACGCCTGGGCGGTTCTCTCCGACCCGGTCCAGAAATCGCTCTACGACAGGGACGTCGCCGGTCCGGTCGAACCGTTGAGTTTCTGGACCGCGTGTCCGTACTGCTACTTTCTCTACGAGTTTCCTGCGGTTTGCGAGGGATGCTGCCTTAGGTGCCAGAATTGCGAGAGGTCTTTTCATGGGCTTTCGATTCCCTCGCTGCCGCCGCTCGTTCCTGGCCAGGAGGCCTATTATTGTAACTGGGGCTGCCTGCCCATGGGTTTTGTGTTTGGAACCTTGGGCTCCGATGGGCCTGGGCCTATGATCGAGAATGGACTGAATAATAATGCGGTCGCGGTTTCGAATGGGATGCGGAAGCGAGGAAGGCCGCGGAAGGGGGTATGA 729 0.6022 MNTSRAEAERLLAIGEKLLQSRDLNGSRDFAILAQEAEPLLEGSDQILAIVDVLHAAEKPISSNEHHLDWYAVLQLDRTCQDLDLIKRQYRRLGLLLHPDKNLFSLADHAFKLVSDAWAVLSDPVQKSLYDRDVAGPVEPLSFWTACPYCYFLYEFPAVCEGCCLRCQNCERSFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGTLGSDGPGPMIENGLNNNAVAVSNGMRKRGRPRKGV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0135 242 SUPERFAMILY Chaperone J-domain 66 133 IPR036869 -
Aed10g0135 242 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Aed10g0135 242 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 1 236 - -
Aed10g0135 242 PRINTS DnaJ domain signature 106 126 IPR001623 -
Aed10g0135 242 PRINTS DnaJ domain signature 90 105 IPR001623 -
Aed10g0135 242 PRINTS DnaJ domain signature 71 89 IPR001623 -
Aed10g0135 242 CDD DnaJ 69 123 IPR001623 -
Aed10g0135 242 SMART dnaj_3 68 126 IPR001623 -
Aed10g0135 242 Gene3D DnaJ domain 55 139 IPR036869 -
Aed10g0135 242 Pfam DnaJ domain 69 131 IPR001623 -
Aed10g0135 242 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Aed10g0135 242 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0135 Aed-Chr10 1029414 1030142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0135 2 222 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 53.719 6.78e-84 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0135 - - gmx:100802055 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed3g1727 3 21900926 21901933 Aed10g0135 10 1029414 1030142 PCT