Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0133 ATGAATGAGGTAATTACAAAGTATAATACGCAGTCCCATGGCATCAACAAACTGGACAGGCCATCATCACTAGAACTGCAGAGCTTATACCGCCTGAACTTCTTGGTGCTAGAGGCTAGCAATAGCGCCAATTTGAGTAAGGAAATTGCATATAGAAGCCAAGAATTAAGTTGGTTGAAAGGCGATGATCTTCAAGGACTAGGTCTAAAGGAGTTGCAGCAACTGGAGAAAACACTTGAAATAGGACTCGATCGTGTGACTGAGATAAAGGAAAAGCAGATAATGAGTCAGATTTCTGAACTTCAGAAAAAGACCACGACTACGACAGGCTACAAAGTTCGTGCAGTTGCTCTTATCGATTGTCCTGATAGGCATCTCACGCTGGTTGCGTTTTGCTAA 399 0.4261 MNEVITKYNTQSHGINKLDRPSSLELQSLYRLNFLVLEASNSANLSKEIAYRSQELSWLKGDDLQGLGLKELQQLEKTLEIGLDRVTEIKEKQIMSQISELQKKTTTTTGYKVRAVALIDCPDRHLTLVAFC 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0133 132 Coils Coil 72 92 - -
Aed10g0133 132 PANTHER MADS-BOX PROTEIN AGL24-LIKE ISOFORM X1 1 107 - -
Aed10g0133 132 Pfam K-box region 41 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed10g0133 132 ProSiteProfiles K-box domain profile. 35 122 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed10g0133 132 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0133 Aed-Chr10 1020897 1023473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0133 1 104 MADS-box Gene Family AT2G22540 52.885 1.04e-25 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0133 - - gmx:100776749 125.176