Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0126 ATGGGCTTTCTCTCTTGCAATGCCGAGTCCGCAATCGCCACCTGCGACCCCCACTTCAAAAGGCACAAGCCCCTCGCCGCAACACCAATCCGCCACTTCCACTACTCCGACATCCTCTCCGCCGCCAACGGCTTCTCCGCCGACACCTTCCTAGGCCGAGGCAGCCACGGCAGAGTCTACCGCGCCACCTTCGACGGCGGAAAACTCCTCGCCGCCGTCAAAACGACTAAGTTCTCCGGCGGCACCAGCTCCACCTCGAAAAACCACGGCACGAAATGCACCGGCTGCGGCAACTGCACCAGCCCCGCCGAAAACGAGATCGAGATCCTCTCCCAAGTCCCCAGCCTCCGCCTCGTCAACCTCATCGGCTTCAGCACCGACCCTAACGGCAACAAATTAATCGTCGTCGAATACATGCCAAACGGCTCGCTCCATGATCTTTTACACTCCGTTAATATTAATAAACCCCCCGGTTGGAACCGTAGGGTCCGGTTCGCGCTTCAGGTCGCCAAAGCCCTCCGCGAATTACACTCCTCCAACCCTCCCGTTATTCACCGTGACGTTAAGTCTTCCAATGTTTTAATCGATCAAGAATGGAACGCGAGGCTCGGTGACTTCGGTTTGGCCTTAAGGGGACACGTGGAGGACGTTCGCGTCAAGTGCACTCCCCCTGCGGGAACGTTAGGTTACCTCGACCCCTGCTATCTTGCACCGGAGGATCTCAGCGCCAAGAGCGACGTCTTCAGCTTCGGGATCTTGCTCTTGGAGATAATCAGCGGAAGGAACGCTATTGATGTTAATTACAGTCCTCCGTCCGTCGTGGACTGGGCCGTGCCTTTGATTAAGCTCGCCGACTTCGCCGGAATCTGCGACCGACGAATCGGACCGCCTCCGGATCCCGCCGTGGTGCGGCAGCTCGCGGTGCTGGCTGCCAGATGCGTGAGGTCGACGGCCGAGAAGCGGCCGTCCATGGCGGAGGTGGTGGAGTGTCTTGATCTGGCGAGGAAGAGGATTCGCGCGTCGCCGATTTGGAACAATCTGAAGCGGCGCGTGGCGCGCGTGGAGAGCGCGCTTCCGGTGGTGGCCTGGGAGGAGTGTGATGATAGGAGTGAGAGATTTGTGAGGATGTTGAAAAGTGGGAGTGGGAGTAAGAGGAACGGGAAAGTATCCAGTGTGTCGCGCGCAGGTTATGGGAGTGAGGCATCCAATGATAAAGTGATGAGGTCAAAGTCCATTGGGTCTGGTTCTGGCTCGTTGAAAGGGAGTTGGGTTAAAATGCAACCGCACTTAACAACTGAGCACGGGTTTGGGAGAAGGAAAGTGAGGCTAAAAAAGTCAAAGTCAATGGGGGTTCTGCAAGGGTCTCTCCTACCACATTATGGCGGCGATAACAATAATGATTTAGTGATTCGTTCGGGAATGGCCAAGTTGGTTGTTACAGATAAGTTGGAAAAGAAAATGCTGGAAAAACCGTTAGTTGAGTATCCTTGCCTTGCAAAAGTGAGAGGAAGCTAA 1515 0.5571 MGFLSCNAESAIATCDPHFKRHKPLAATPIRHFHYSDILSAANGFSADTFLGRGSHGRVYRATFDGGKLLAAVKTTKFSGGTSSTSKNHGTKCTGCGNCTSPAENEIEILSQVPSLRLVNLIGFSTDPNGNKLIVVEYMPNGSLHDLLHSVNINKPPGWNRRVRFALQVAKALRELHSSNPPVIHRDVKSSNVLIDQEWNARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIKLADFAGICDRRIGPPPDPAVVRQLAVLAARCVRSTAEKRPSMAEVVECLDLARKRIRASPIWNNLKRRVARVESALPVVAWEECDDRSERFVRMLKSGSGSKRNGKVSSVSRAGYGSEASNDKVMRSKSIGSGSGSLKGSWVKMQPHLTTEHGFGRRKVRLKKSKSMGVLQGSLLPHYGGDNNNDLVIRSGMAKLVVTDKLEKKMLEKPLVEYPCLAKVRGS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0126 504 MobiDBLite consensus disorder prediction 380 420 - -
Aed10g0126 504 SMART serkin_6 45 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0126 504 SUPERFAMILY Protein kinase-like (PK-like) 29 332 IPR011009 -
Aed10g0126 504 ProSitePatterns Protein kinases ATP-binding region signature. 51 74 IPR017441 GO:0005524
Aed10g0126 504 PANTHER OS01G0750732 PROTEIN 1 466 - -
Aed10g0126 504 PANTHER - 1 466 - -
Aed10g0126 504 ProSiteProfiles Protein kinase domain profile. 45 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0126 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Aed10g0126 504 Gene3D Transferase(Phosphotransferase) domain 1 139 349 - -
Aed10g0126 504 Gene3D Phosphorylase Kinase; domain 1 30 138 - -
Aed10g0126 504 MobiDBLite consensus disorder prediction 383 420 - -
Aed10g0126 504 Pfam Protein tyrosine and serine/threonine kinase 49 331 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0126 Aed-Chr10 964933 966447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0126 31 342 Receptor kinase-like Gene Family AT3G59420 38.730 8.28e-64 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aed10g0126 PK_Tyr_Ser-Thr 6.7e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0126 - - gmx:100799382 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0126 10 964933 966447 Aed10g0126 10 964933 966447 ECH
Aed3g1711 3 21720652 21722043 Aed10g0126 10 964933 966447 PCT