Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0123 ATGGCTCCCAGTTTTGACTTTGTTTCTAGCCTCCTTTGCACCGAGGAAAGCACCGTTTTCGACGATACCTATAACGGCGGTACGATGACGATGATGGGGGTGTACGAGGACAGGTGGAGTCCTAAGAGGCACCACTTTGATGAACCAGATGAGTTGCCATTGATGAGTGATGAGAGCTTGGCGATGACGGTGAAAAAAGAGTGCCAACACTGGCCGGGTCTGCGTTACTTCGATAGGCTTCAGAGCGGTGATTTGGACTTTGGTGCCAGAGTAGAGGCTATTGATTGGATTCACAAGGTCCGATCGCATTTTGGATTTGGTCCTCTCTCTGGATATCTATCTATAAATTACTTGGACCGATTCCTTTCTGCATACGAATTACCAAAGGGTAGAGCTTGGACAATGCAATTGTTGGCTGTGGCGTGTTTATCTTTGGCAGCCAAAGTAGATGAGACAGAAGTTCCACTCACTATTGATTTGCAGGTTGGGGAATCAAAGTTTTTATTTGAGGCTAAAGCCATACAGAGAATGGAGCTTCTAGTACTGAGCACATTGAAGTGGAGAATGCAAGCAATTACTCCTTTCACCTTCCTTGATTACTTCCTTTGTAAGATCAATGATGATCAAAGTCCGATAAGGCCTTCAATTATGCGATCCATCCAACTTATATCGAGCACTGCAAGAGGGATTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCAGTAGCTATGTATGTCATGGGAGAAACCCAAACAGCCGACACTGAGAAAGCAATTTCTGTTCTGATTCAACACGAGAGGTTATTGAAGTGTGTTGAAATGATTCAAGAGTTGTCATCCAACATTGGGTCTGCTAAGGATTCATCAAGTGCTTCTGTTTCTGTGACTTGCTTACCCCAAAGTCCAATAGGTGTGTTAGATGCATTGTGCTTCAGCTACAAAAGCGATGACACAAATGCTGGTTCATGTGTTAATTCTTCACACAACATCCCTGATGCCAAAAGGAGGAAGTTAAACAACAAAACCTGTGGAGCTGAGCTACTGTAG 1053 0.4406 MAPSFDFVSSLLCTEESTVFDDTYNGGTMTMMGVYEDRWSPKRHHFDEPDELPLMSDESLAMTVKKECQHWPGLRYFDRLQSGDLDFGARVEAIDWIHKVRSHFGFGPLSGYLSINYLDRFLSAYELPKGRAWTMQLLAVACLSLAAKVDETEVPLTIDLQVGESKFLFEAKAIQRMELLVLSTLKWRMQAITPFTFLDYFLCKINDDQSPIRPSIMRSIQLISSTARGIDFLEFKPSEIAAAVAMYVMGETQTADTEKAISVLIQHERLLKCVEMIQELSSNIGSAKDSSSASVSVTCLPQSPIGVLDALCFSYKSDDTNAGSCVNSSHNIPDAKRRKLNNKTCGAELL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0123 350 Pfam Cyclin, C-terminal domain 192 288 IPR004367 -
Aed10g0123 350 CDD CYCLIN 90 182 IPR013763 -
Aed10g0123 350 Gene3D - 73 190 - -
Aed10g0123 350 SMART Cyclin_C_2 192 303 IPR004367 -
Aed10g0123 350 SUPERFAMILY Cyclin-like 47 189 IPR036915 -
Aed10g0123 350 Pfam Cyclin, N-terminal domain 61 189 IPR006671 -
Aed10g0123 350 SUPERFAMILY Cyclin-like 175 281 IPR036915 -
Aed10g0123 350 SMART cyclin_7 95 183 IPR013763 -
Aed10g0123 350 Gene3D - 62 276 - -
Aed10g0123 350 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 342 - -
Aed10g0123 350 PANTHER CYCLINS 1 342 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0123 Aed-Chr10 932793 936590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0123 26 325 Core Cell Cycle Gene Families AT2G22490 45.079 3.03e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0123 K18810 - gmx:547739 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0123 10 932793 936590 Aed10g0123 10 932793 936590 ECH