Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0113 ATGAAAGGAGAATACGTAGAGCAACATTCTAAGAATGAAACAACACCACCTAGTATGTTCTCAAAGCTTCAGCCACAACACCTTCCTTTCCCACACCACCCTTTCCAGCTCGCCGCGGAGGAAGATAACCGCGCCGCCGCCGCCGCCGCACCCAACACTGCTCAGAAGGCGAACTCCTCCGGCGGCGACGGGGCTACCATCGAGGTTGTTCGGCGTCCCAGGGGGCGACCTCCCGGGTCCAAAAACAAACCCAAGCCACCGCTCATCATAACCCGAGACCCGGAACCCGCTATGAGCCCCTACATTTTAGAAGTTTCTGGAGGAAACGACGTCGTGGAGGCCATCGCGCAGTTCAGCCGCCGCAAGAACATGGGTATCTGCGTCCTCACGGGCTCCGGAACCGTCGCTAACGTCACGCTCCGTCAGCCTTCCACCACGCCCGGCACCACCGTTACTTTTCACGGCCGTTTCGATATTCTCTCCGTATCCGCCACCTTTCTTCCGCAGCAGTCGGGCGCTTCGCCGGCGGTTCCCAACGGCTTCTCCATCTCGCTCGCCGGACCGCAGGGGCAGATCGTCGGAGGACTTGTCGCCGGCGGACTCATGGCCGCCGGTACGGTGTTCGTGATCGCTGCTTCGTTCAACAACCCGGCGTACCACAGGCTTCCGCCGGAGGAAGAGGGCGCATCGGGCGGAGATGGACATTCGCCGCCAGTGTCCGGCGGCGGAGAAAGTGGGCATGGACAAGCAGAGTCGTGTGGAATGTCCATGTACAGCTGTCACTTGCCCTCTGATGTCATTTGGGCTCCAACGGCCAGACCACCACCACCGCCACCTCCTTACTGA 846 0.6076 MKGEYVEQHSKNETTPPSMFSKLQPQHLPFPHHPFQLAAEEDNRAAAAAAPNTAQKANSSGGDGATIEVVRRPRGRPPGSKNKPKPPLIITRDPEPAMSPYILEVSGGNDVVEAIAQFSRRKNMGICVLTGSGTVANVTLRQPSTTPGTTVTFHGRFDILSVSATFLPQQSGASPAVPNGFSISLAGPQGQIVGGLVAGGLMAAGTVFVIAASFNNPAYHRLPPEEEGASGGDGHSPPVSGGGESGHGQAESCGMSMYSCHLPSDVIWAPTARPPPPPPPY 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0113 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 21 279 - -
Aed10g0113 281 Gene3D - 99 232 - -
Aed10g0113 281 ProSiteProfiles PPC domain profile profile. 95 235 IPR005175 -
Aed10g0113 281 MobiDBLite consensus disorder prediction 1 95 - -
Aed10g0113 281 PIRSF ESCAROLA 9 268 IPR014476 GO:0003680
Aed10g0113 281 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 21 279 IPR014476 GO:0003680
Aed10g0113 281 MobiDBLite consensus disorder prediction 221 254 - -
Aed10g0113 281 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 229 - -
Aed10g0113 281 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 216 IPR005175 -
Aed10g0113 281 CDD DUF296 100 214 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0113 Aed-Chr10 863160 864005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0113 1 277 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 59.655 1.47e-104 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0113 - - gmx:100815772 471.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0113 10 863160 864005 Aed10g0113 10 863160 864005 ECH