Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0102 ATGGTGTTGAGGAAAGTAGGGAAGTACGAGATTGGGAGGACGATTGGGGAGGGAACCTTTGCGAAGGTTAAATTCGCTCAGAACACAGAAACTGGCGAGAGCGTGGCAATGAAGGTGCTCGACCGTGCCACCATCATCAAGCACAACATGGTCGACCAGATCAAGAGGGAGATTTCTATTATGAAGCTAGTTAGGCATCCTTATGTTGTTCGCCTGCACGAGGCATGTCATGTTCTTGCAAGCCGTACTAAGATTTATATTATATTGGAGTTCATCACGGGTGGTGAATTGTTTGATAAAATTATACACCATGGCCGCCTTAGTGAAGCTGATTCTAGAAGATATTTCCAGCAGCTTATTGATGGTGTAGATTATTGCCACAGTAAGGGAGTTTATCACAGAGATTTAAAGCCTGAAAATCTCTTACTTGATTCGCTAGGAAATATAAAGATTTCAGATTTCGGTTTGAGTGCATTGCCTGAGCAGGGGGTGAGTATCCTTCGGACAACTTGTGGGACTCCAAACTATGTGGCTCCTGAGGTACTCAGTCATAAGGGTTACAATGGTGCTGTGGCAGATGTTTGGTCCTGTGGGATTGAGAGAGCAGAGTTTTTATGCCCTCCTTGGTTTCCTGTGGGAGCAAAAATGTTGATACATAGAATTTTGGACCCAAATCCTGAAACCCGTATAACCATTGAAAAGATAAGAAATGATGAATGGTTTCAGCAGAGCTATGTACCTGTCAGTCTTCTTGAGTATGAAGATGTAAATCTTGATGATGTGAATGCTGCTTTTGACGATGCTGAGGAACAGATGGCTGATCAACCATGTGATAACGAGGACATGGGTCCTCTAATGCTTAATGCATTTGACTTGATAATTCTGTCTCAAGGCTTAAATCTTGCAACAATCTTTGATCGTGGGCAGGACTCTGTGAAGTACCAAACCCGCTTTATCTCTCAAAAGCCAGCAAAGGTGGTTTTATCAAGTATGGAAGTTGTGGCACAGTCAATGGGATTTAAGACGCATATTCGCAACTACAAGATGAGGGTAGAGGGTATTTCGGCAAATAAAACATCCTATTTCTCTGCCATCCTGGAGATTTTTGAAGTGGCTCCTACATTTTATATGGTGGACATTCAGAAAGCAGCTGGTGATACTGGGGAATACCTCAAGTTTTACAAGAACTTTCGTAGCAATCTTGATGACATAATCTGGAAACCGCCTCATGAAGCAAGCAAACCAAGGAACTCCAAAACCAAAACCAAAAGACGATAG 1278 0.4264 MVLRKVGKYEIGRTIGEGTFAKVKFAQNTETGESVAMKVLDRATIIKHNMVDQIKREISIMKLVRHPYVVRLHEACHVLASRTKIYIILEFITGGELFDKIIHHGRLSEADSRRYFQQLIDGVDYCHSKGVYHRDLKPENLLLDSLGNIKISDFGLSALPEQGVSILRTTCGTPNYVAPEVLSHKGYNGAVADVWSCGIERAEFLCPPWFPVGAKMLIHRILDPNPETRITIEKIRNDEWFQQSYVPVSLLEYEDVNLDDVNAAFDDAEEQMADQPCDNEDMGPLMLNAFDLIILSQGLNLATIFDRGQDSVKYQTRFISQKPAKVVLSSMEVVAQSMGFKTHIRNYKMRVEGISANKTSYFSAILEIFEVAPTFYMVDIQKAAGDTGEYLKFYKNFRSNLDDIIWKPPHEASKPRNSKTKTKRR 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0102 425 Gene3D Transferase(Phosphotransferase) domain 1 3 285 - -
Aed10g0102 425 ProSiteProfiles NAF domain profile. 282 306 IPR018451 GO:0007165
Aed10g0102 425 SMART serkin_6 9 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0102 425 CDD CIPK_C 288 397 - -
Aed10g0102 425 Pfam NAF domain 284 342 IPR004041 GO:0007165
Aed10g0102 425 SUPERFAMILY Protein kinase-like (PK-like) 6 257 IPR011009 -
Aed10g0102 425 Pfam Protein kinase domain 9 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0102 425 ProSiteProfiles Protein kinase domain profile. 9 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0102 425 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 199 - -
Aed10g0102 425 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 199 422 - -
Aed10g0102 425 PANTHER - 2 199 - -
Aed10g0102 425 PANTHER - 199 422 - -
Aed10g0102 425 Gene3D Kinase associated domain 1, KA1 286 407 - -
Aed10g0102 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Aed10g0102 425 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0102 Aed-Chr10 795660 801081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0102 1 367 CBL-interacting serine-threonine protein kinases AT4G24400 76.471 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Aed10g0102 Pkinase 5.7e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0102 - - gmx:100785444 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0102 10 795660 801081 Aed10g0102 10 795660 801081 ECH