Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0089 ATGGCGAATAACGAAACTGAAAAACAGCAACGCCCACGCCAACACCGCCGGTCCAAGGCTCGACATGCAGCGACTCGACCGGCGCCCCCGGCTAGGGTATCGCTGAGGCTGTTGCTGCGGGTAGCGTCGGTTGCGGGTGGAATTCAGTTCGGCTGGGCCCTGCAGCTGTCTCTTCTCACGCCCTACGTGCAGCAGCTCGGGATCCCGCACGTGTGGGCCAGCATCATATGGCTCTGTGGGCCGCTCTCCGGTCTCCTGGTCCAGCCCCTCGTCGGCCACTTGAGCGACCGCTGCACCAGCCGCTTCGGCCGCCGGAGACCGTTTATCTTGGGCGGAGCATTGTCAATCGTCGCCTCTGTTCTCATCATCGGTCACTCCGCCGACATCGGCTGGTGGTTCGGCGACACCAGTGACCATCGCCCCTGGGCTGTCGGCGTTTTCGTTTTCGGCTTTTGGATTTTGGACGTTGCTAACAACGTCACTCAGGGCCCTTGTAGAGCTTTGCTTGGTGATCTCACTGGCAAGGATCATCGAAGGACACGTGTTGCAAATGCTTATTTCTCCCTGTTTATGGCTATTGGTAATGTTCTTGGATATGCAACTGGATCATACAATGGTTGGTACAAGATCTTTTCTTTCACACGTACCCCTGCATGCAATATTAGTTGTGCCAATCTCAAATCTGCTTTCCTTCTGGACATTGTTTTCATTGCCATCACCACATCCATAAGCATCGTGGCAGCTAAAGAAGTGCCTCTAAGTTCAAGTAGAGAAGCAGCATCAGCAGAAGGGGAATCAGGTGGTGCAGGAGAAGCTTTCCTTTGGGAGCTATTTGGGACGTTCAGATACTTTTCGACCCCTGTATGGACAATACTGTCTGTTACTGCTCTAACATGGATTGGGTGGTTTCCATTTCTCCTATTTGATACTGATTGGATGGGCCGAGAGATTTATGGTGGTGAGCCAAATGAAGGCCCTAATTATGATCATGGAGTTAGAATGGGGGCACTTGGCTTATTGCTTAATTCAATTGTTCTTGGAATAACGTCAGTACTCATGGAGAAGCTATGCAGGAAGCGGGGACCTGGTTTTGTGTGGGGAGTTTCAAATATCCTGATGGCTGTCTGCTTTGTTGCAATGCTTGTTTTAACCTATGTGGCAAATAACATGGGCTATTTAGGCAAAGATCTACCACCAACTAGCATTGTCATAGCTGCATTGACAATCTTTACCGTTCTTGGCTTTCCACTTGCAATCACTTACAGCGTTCCATATGCCTTAATTTCGACACATATTCAGTCATTGGGGCTTGGCCAAGGATTGTCAATGGGAGTTCTAAATCTTGCAATAGTGTTCCCACAGATGGTGGTGTCCCTGGGAAGTGGACCATGGGATCAGGTATTTGGTGGAGGAAACTCTCCAGCCTTTGGTGTGGCAGCTGTTGCAGCCATTGTCAGTGGATTCATAGCTGTCTTGTGTATTCCCCGATCTGGTGGTGATCAAAAGCCTAGAAGCCAAGCATGA 1524 0.5033 MANNETEKQQRPRQHRRSKARHAATRPAPPARVSLRLLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHVWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFILGGALSIVASVLIIGHSADIGWWFGDTSDHRPWAVGVFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNVLGYATGSYNGWYKIFSFTRTPACNISCANLKSAFLLDIVFIAITTSISIVAAKEVPLSSSREAASAEGESGGAGEAFLWELFGTFRYFSTPVWTILSVTALTWIGWFPFLLFDTDWMGREIYGGEPNEGPNYDHGVRMGALGLLLNSIVLGITSVLMEKLCRKRGPGFVWGVSNILMAVCFVAMLVLTYVANNMGYLGKDLPPTSIVIAALTIFTVLGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVFPQMVVSLGSGPWDQVFGGGNSPAFGVAAVAAIVSGFIAVLCIPRSGGDQKPRSQA 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0089 507 CDD MFS_SLC45_SUC 38 492 - -
Aed10g0089 507 Pfam MFS/sugar transport protein 53 200 - -
Aed10g0089 507 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 16 505 - -
Aed10g0089 507 Gene3D MFS general substrate transporter like domains 322 502 IPR036259 -
Aed10g0089 507 Gene3D MFS general substrate transporter like domains 36 262 IPR036259 -
Aed10g0089 507 PANTHER SUGAR TRANSPORTER 16 505 - -
Aed10g0089 507 TIGRFAM GPH_sucrose: sucrose/H+ symporter 34 497 IPR005989 GO:0005887|GO:0008515|GO:0015770
Aed10g0089 507 SUPERFAMILY MFS general substrate transporter 38 500 IPR036259 -
Aed10g0089 507 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0089 Aed-Chr10 657498 662954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0089 1 503 Sucrose Transporter Gene Family AT1G09960 68.762 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0089 K15378 - gmx:100787939 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0089 10 657498 662954 Aed10g0089 10 657498 662954 ECH