Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0088 ATGTTTTCCGCCTTACGAGTCTTTCTTCTTCTTCTCTCACTACTACTCAGCAACGCCCAATCTAACGACGACGACGACCAGCGTCAAATCCTTCTCAACCTAAAGTCCTCCCTCCACAATTCAAATTCCAAACTCTTTGACTCATGGAATGCCACCAATTCCGTTTGCACTTTTCACGGAGTTACTTGCAACTCCCTGAACTCCGTCATCGAAATCAACCTCTCCAACCAAACTCTCTCCGGAGTTCTCCCCTTCGACTCGCTCTGCAACCTCACATCTCTCCAAAAACTCGCATTCGGTTTCAACAACTTGCACGGCAATGTTTCAGAGAGCCTTAGAAACTGCGTCGGTTTGCGCTTCTTGGATTTGGGAAACAACCATTTCTCCGGTCCCTTCCCCGACATATCTCCACTCACCCAATTGCAGTACCTGTTTCTAAACACGAGTGGTTTTTCGGGTACTTTTCCGTGGCAATCGCTGTTAAACATGACGGGTCTGTTACAGTTAAGTGTCGGAGATAACCCTTTCGACCTCACGCCGTTTCCCAAAGAGGTGGTGAACCTCAAGAAACTCAATTGGCTCTACCTCTCGAACTGCACCCTCGGAGGGAAGCTTCCGGTTGGACTCGGAAACCTCACCGACCTCACCCACTTGGAATTCTCCGACAATTTCATCACCGGTGATTTTCCCGCCGAGATTGTGAACCTTCGGAAGCTCTGGATGCTTGAGTTCTTCAACAACTCCTTAACGGGAAAGATTCCAACCGGCTTGAGAAACCTCACGGGGCTTGAGTTTTTGGACGGGTCCATGAATAAACTCGAAGGGGATCTCTCTGAAGTCAAGTACTTGACCAAACTGGTTTCTCTGCAGTTCTTTGAAAACAATCTGTCGGGGGAGATTCCGATTGAAATTGGCGACTTCAAACACCTCAAGCAGTTGTCTTTGTACAGGAACAAATTGACGGGTTCTATTCCACAGAAGGTTGGTTCCTGGTCCGAGTTTGATTACATCGACGTGTCAGAGAATTTCTTGACGGGGACGATTCCACCGGATATGTGTAAGAAGGGAACGATGACGAAGCTGCTTGTGCTTCAGAACAACCTCTCCGGCGAGATTCCGGCCTCCTACGGAGACTGTTTGACTCTGCAACGATTCAGAGTCAGCAATAACTCGCTCTCCGGCACCGTGCCACCCGCGATTTGGGGATTACCAAACGCGGAAATAATCGACGTTGAGCTGAATCAGTTGGAAGGTTCGGTTTCTTCGGACATCAAAAACGCGAAAACACTTGCCACTGTATTCGCCAGGCAGAACCGGTTGTCCGGTGAAATACCCGAAGAAATCTCAAAAGCGACGTCGTTGGGGACAGTGGACCTCAGCGAGAATCAAATCTCGGGGAACATTCCAGAAGGAATCAGCGAGCTAAAAGAACTAGGCAGCCTTCATCTACAGAGCAACAAGCTATCAGGTTCGATACCGGAATCTCTAGGTTCCTGTAAATCCCTCAACCACATTGACCTATCGAAGAATTCACTCTCCGGAAAAATCCCTTCCTCCTTGGGTTCCTTCCCTGCTTTGAATTCTCTGAATCTTTCAGAGAACAAACTCTCCGGTGAAATCCCAAAGAGTATAGCTTTCCTCAGATTGAGCCTCTTTGACTTATCGTACAACCGGTTAACCGGTCCAATTCCACAGGCTCTAACCCTAGAAGCTTACAACGGAAGCCTCTCCGGAAACCCTGATTTGTGCAGCGTGGACGCGATCAGCACCTTCCCGCGCTGCCCTGCTTCCTCCGGCGGCATGTCGAAGGACACGCGCGCGCTCGTGATATGCTTCGCGGTGGCGTCGATATTGCTGGTCTCGTGTTTGGGAGTTTACTTGCAACTCAAGAGGAGGAAGGAGGAGGAGGGTAATAAATACGGAGAGCGGTCGCTGAAGGAAGAATCCTGGGACGTGAAATCGTTCCACGTGTTGAGTTTCTCGGAGCGGGAGATTCTAGATTCCATAAAGCAGGAGAATCTCATAGGAAAAGGAGGCTCGGGGAACGTGTACGGAGTCACGCTTTCCAACGGGAAAGAACTTGCGGTGAAGCATATCTGGAACACCGATGTCCACGCAAGGAGAAAGGCGTCGTCCACGTGGAGCAGCACTCCCATGCTTGGGCGCGGTGGTGGGAAGTCGAAGGAGTTTGACGCGGAGGTTGAGGCTTTGAGCTCCATAAGGCACGTGAATGTCGTCAAGCTTTTTTGCAGCATAACCAGCGAGGACTCGAGCTTGTTGGTCTACGAGTATTTGCCCAATGGAAGCTTGTGGGACCGGCTTCACACGAGTAGAAAAATGGAGCTTGATTGGGAAACGAGGTACGAAATCGCGGTTGGAGCAGCGAAAGGGTTGGAGTATTTGCATCATGGCTGTGAGAGGCCTGTGATTCATAGAGATGTTAAGTCTAGTAATATCTTGTTGGACGAGTTTTTGAAACCTAGGATTGCGGATTTTGGGCTTGCTAAGGTTGTCCAAGACAACGTTGGCAAGGATTCCTCCACTCGTGTCATTGCCGGAACCCACGGCTACATTGCTCCTGAATATGGGTACACATACAAAGTGAATGAGAAGAGTGATGTGTACAGCTTCGGGGTGGTGTTAATGGAGCTAGTGACAGGGAAAAGGCCAATGGAGGCAGAGTTTGGGGAAAATAAGGACATAGTGAGCTGGGTTCATAACAAGGCACGGAGCAAAGAGGGGCTTAGGAGTGCGGTGGATTCGAGGATTCCTGAGATGTATACAGAGGAAGCTTGTAAGGTGTTGAGAACTGCGGTTTTGTGCACGGGGACTCTTCCTGCTTTGAGACCAACCATGAGAGCTGTGGTTCAGAAACTTGAGGATGCTGAGCCTTGTAAATTGCTTGGGATTGTTATTACCAAAGATGGCAGGTACCCTAAATCCAACGAATACTGGATAATAACAAATGATTGTGCGTCGTGCGATGTCATAACAAGGCAAATTGCTTGGGACGGTGAATCAACTCACAAATATTTACTAAAGCCCAAAGGCATCAAGCCCAAGCCGTCCAGGAAAAATAACAAAAGTCCAAAGGCCGCAAGCCCAAGCCTGAGGGGTAACAATGCTGGGAAGCTCAATCTTCTTGCACTCGTTAAACATTTTCCATCAATAACATATAGCGATTTTAATCAAAACTTATCCCGACAATCATCCTATCTAGTATCTATATATGTGGAACGAAATAATTTGACAAGACATTACGACGACAAAGGATAG 3276 0.485 MFSALRVFLLLLSLLLSNAQSNDDDDQRQILLNLKSSLHNSNSKLFDSWNATNSVCTFHGVTCNSLNSVIEINLSNQTLSGVLPFDSLCNLTSLQKLAFGFNNLHGNVSESLRNCVGLRFLDLGNNHFSGPFPDISPLTQLQYLFLNTSGFSGTFPWQSLLNMTGLLQLSVGDNPFDLTPFPKEVVNLKKLNWLYLSNCTLGGKLPVGLGNLTDLTHLEFSDNFITGDFPAEIVNLRKLWMLEFFNNSLTGKIPTGLRNLTGLEFLDGSMNKLEGDLSEVKYLTKLVSLQFFENNLSGEIPIEIGDFKHLKQLSLYRNKLTGSIPQKVGSWSEFDYIDVSENFLTGTIPPDMCKKGTMTKLLVLQNNLSGEIPASYGDCLTLQRFRVSNNSLSGTVPPAIWGLPNAEIIDVELNQLEGSVSSDIKNAKTLATVFARQNRLSGEIPEEISKATSLGTVDLSENQISGNIPEGISELKELGSLHLQSNKLSGSIPESLGSCKSLNHIDLSKNSLSGKIPSSLGSFPALNSLNLSENKLSGEIPKSIAFLRLSLFDLSYNRLTGPIPQALTLEAYNGSLSGNPDLCSVDAISTFPRCPASSGGMSKDTRALVICFAVASILLVSCLGVYLQLKRRKEEEGNKYGERSLKEESWDVKSFHVLSFSEREILDSIKQENLIGKGGSGNVYGVTLSNGKELAVKHIWNTDVHARRKASSTWSSTPMLGRGGGKSKEFDAEVEALSSIRHVNVVKLFCSITSEDSSLLVYEYLPNGSLWDRLHTSRKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKVVQDNVGKDSSTRVIAGTHGYIAPEYGYTYKVNEKSDVYSFGVVLMELVTGKRPMEAEFGENKDIVSWVHNKARSKEGLRSAVDSRIPEMYTEEACKVLRTAVLCTGTLPALRPTMRAVVQKLEDAEPCKLLGIVITKDGRYPKSNEYWIITNDCASCDVITRQIAWDGESTHKYLLKPKGIKPKPSRKNNKSPKAASPSLRGNNAGKLNLLALVKHFPSITYSDFNQNLSRQSSYLVSIYVERNNLTRHYDDKG 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0088 1091 Gene3D Phosphorylase Kinase; domain 1 652 764 - -
Aed10g0088 1091 Gene3D Transferase(Phosphotransferase) domain 1 765 967 - -
Aed10g0088 1091 SMART serkin_6 669 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0088 1091 Pfam Leucine rich repeat 477 536 IPR001611 GO:0005515
Aed10g0088 1091 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Aed10g0088 1091 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 7 974 - -
Aed10g0088 1091 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Aed10g0088 1091 Gene3D Ribonuclease Inhibitor 179 280 IPR032675 -
Aed10g0088 1091 SUPERFAMILY L domain-like 278 592 - -
Aed10g0088 1091 ProSitePatterns Protein kinases ATP-binding region signature. 675 697 IPR017441 GO:0005524
Aed10g0088 1091 Pfam Protein kinase domain 671 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0088 1091 ProSiteProfiles Protein kinase domain profile. 669 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0088 1091 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Aed10g0088 1091 SUPERFAMILY L domain-like 25 275 - -
Aed10g0088 1091 Gene3D Ribonuclease Inhibitor 354 467 IPR032675 -
Aed10g0088 1091 MobiDBLite consensus disorder prediction 1014 1040 - -
Aed10g0088 1091 Gene3D Ribonuclease Inhibitor 468 590 IPR032675 -
Aed10g0088 1091 SUPERFAMILY Protein kinase-like (PK-like) 657 959 IPR011009 -
Aed10g0088 1091 Gene3D Ribonuclease Inhibitor 281 353 IPR032675 -
Aed10g0088 1091 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 7 974 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0088 Aed-Chr10 643677 649435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0088 2 975 Receptor kinase-like Gene Family AT1G09970 59.451 0.0 1135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aed10g0088 Pkinase 7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0088 - - gmx:100779554 1676.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0088 10 643677 649435 Aed10g0088 10 643677 649435 ECH