Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0069 ATGGCCATCGCAACAGAGACTCAACCTCAACCTCAACCTCTACAGCACAAGGATTCTTTGGAGGTTTCGGGTTCAGCTGCGGAGCAAAGAAGGTGGACGCTTAACGATTTCGATATCGGAAAGCCTCTTGGAAGGGGAAAATTCGGCCACGTCTATTTGGCCAGAGAGAAGACTAGTAATCATATTGTTGCTTTGAAAGTACTCTTCAAGAGCCAATTGCAACAATCCCAAGTTGTGCATCAACTTCGACGTGAAGTTGAAATACAAAGTCATCTCCGACATCCCCACATCTTGCGCCTCTATGGATACTTTTATGATCAGAAACGAGTTTACTTGATTTTAGAGTATGCGCCCAAAGGTGAACTTTACAAGGAATTGCAAAAATGCAAATATTTCAGTGAAAGGCGTGCAGCTACTTATATTGCATCATTGGCCCGAGCCCTTATCTATTGCCATGGAAAGCATGTAATACATAGGGACATTAAACCAGAGAATCTTCTTGTTGGTGCACAGGGTGAGCTGAAAATAGCAGACTTTGGGTGGTCAGTGCACACATTCAATCGCAGGCGGACCATGTGTGGCACACTGGATTACCTTCCTCCCGAGATGGTGGAGAGTGTAGAACATGATGCGAGTGTGGATATATGGAGCCTTGGTGTCTTGTGCTATGAGTTTCTTTATGGAGTCCCTCCCTTTGAGGCTAAAGAACATTCTGATACTTACAGGAGGATAATACAAGTGGATCTGAAGTTCCCTCATAAACCGATTGTGTCTTCAGCTGCGAAGGAACTCATTAGTCAGATGCTAGTCAAGGATTCCTCTCAACGTCTACCATTGCACAAACTCCTTGAACACCCCTGGATTGTTCAGAATGCCGAGCCCTCCGGTGTATATAGGGGCTAG 903 0.4518 MAIATETQPQPQPLQHKDSLEVSGSAAEQRRWTLNDFDIGKPLGRGKFGHVYLAREKTSNHIVALKVLFKSQLQQSQVVHQLRREVEIQSHLRHPHILRLYGYFYDQKRVYLILEYAPKGELYKELQKCKYFSERRAATYIASLARALIYCHGKHVIHRDIKPENLLVGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVEHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPHKPIVSSAAKELISQMLVKDSSQRLPLHKLLEHPWIVQNAEPSGVYRG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0069 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Aed10g0069 300 PIRSF ILK 6 285 - -
Aed10g0069 300 Gene3D Transferase(Phosphotransferase) domain 1 121 296 - -
Aed10g0069 300 Pfam Protein kinase domain 39 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0069 300 PANTHER SERINE/THREONINE-PROTEIN KINASE AURORA-1 1 300 - -
Aed10g0069 300 Gene3D Phosphorylase Kinase; domain 1 24 120 - -
Aed10g0069 300 SMART serkin_6 37 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0069 300 MobiDBLite consensus disorder prediction 1 21 - -
Aed10g0069 300 ProSiteProfiles Protein kinase domain profile. 37 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0069 300 SUPERFAMILY Protein kinase-like (PK-like) 27 292 IPR011009 -
Aed10g0069 300 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Aed10g0069 300 MobiDBLite consensus disorder prediction 1 19 - -
Aed10g0069 300 CDD STKc_Aurora 36 289 - -
Aed10g0069 300 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 1 300 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0069 Aed-Chr10 483405 486111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0069 28 299 CBL-interacting serine-threonine protein kinases AT5G10930 35.125 7.30e-56 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Aed10g0069 Pkinase 4.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0069 K08850 - gmx:100803678 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0069 10 483405 486111 Aed10g0069 10 483405 486111 ECH