Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0058 ATGGATGAGTACGATAGTGGTGGCCGCAGCGCTGATAAGGCGCCCGAAGCCGAAGACGAAGGCACCACTGCTCCTATTCCAGAGAAGGTTCAAGTTGGTGGTTCCCCGTTGTACAGAGTTGAGAGAAAACTTGGGAAGGGAGGTTTTGGACAGGTAGCCTTAAAATTTGAGCATAGAAGCAGCAAGGGGTGCAATTATGGACCTCCATATGAGTGGCAGGTTTACAATGCATTAGGTGGTAGTCATGGAGTTCCGCGAGTTCATTATAAGGGACGGCAAGGTGACTACTATATAATGGTCATGGATATGCTTGGCCCTAGCCTGTGGGATGTTTGGAATAACAACAATCCTCATATGATGTCTACTGAAATGGTTGCATGCATTGCAATTGAGGCTATCTCCATATTAGAGAAGATACATTCTAGAGGATATGTGCACGGTGATGTAAAACCGGAGAACTTTTTGCTTGGACCCCCTGGAACTCCTGATGAAAAGAAGTTGTTTCTGGTTGATCTTGGATTAGCAACTCGGTGGCGTGATAGTTCAACTGGCCTTCATGTTGACTATGATCAACGTCCAGATGTTTTTAGGGGCACAGTTCGTTATGCTAGCGTGCATGCTCATCTTGGTAGAACTGGTAGCAGGCGAGATGACTTGGAATCTCTTGCTTACACTCTTGTCTTTCTAATTCGTGGTCGGCTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAAAAGATGGCCACTTCTCCAGAAACCTTGTGTTGCTTTTGTCCTCAACCTTTTCGGCAATTTGTTGAATATGTAGTGAATTTGAAGTTTGATGAAGAACCGAATTATGCAAAATACATATCCCTTTTTGATGGAATTGTGGGCCCAAATCCAGACATCAGGCCAATAAACACTGAAGGTGCTCAGAAGGTTGGACATAAGAGGGGGCGATTGACCATAGAAGAAGATGATGATGAACAACCCAAGAAGAAGGTTCGAATGGGAATGCCTGCTACGCAATGGATTAGTATTTACAATGCTCGTCGACCCATGAAGCAAAGGTATCATTATAATGTTGCTGATGTGCGGCTGTCCCAACACATTGATAAAGGAAATGAAGATGGTTTATTTATCAGCAGTGTGGCATCTTGTTCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCACTGCACAAGTTTATAAACTCTCTTCCTACTTTCTTCACAAGGAATGGATTATGGAACAATGGGAGAAGAATTATTACATTAGTGCCATAGCTGGAGCTAATAATGGATCCTCATTGGTTGTAATGTCCAAAGGTACCCAGTACTTACAGCAATCCTATAAAGTCAGTGATTCATTTCCATTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTATGTCACTGCTATGACCACTGCCAGCTCTAGATGGGCAATTGTTATGTCCCGTGGGGCTGGTTTTTCGGATCAGGTTGTGGAACTTGATTTCTTGTATCCCAGTGAAGGTATTCATCGAAGGTGGGATAGTGGCTATCGCATCACCTCAACTGCTGCAACATGGGACCAAACTGCTTTAGTTCTTAGCATCCCAAGAAGAAAACCAGCTGATGAAACTCAGGAGACACTCCGCACATCTGCTTTTCCTAGTACTCATGTCAAGAAGGTTGTTGTTTCTACATTTTCAATCTATTTGATTGTTTTTGAATGGGAGATATAA 1740 0.4299 MDEYDSGGRSADKAPEAEDEGTTAPIPEKVQVGGSPLYRVERKLGKGGFGQVALKFEHRSSKGCNYGPPYEWQVYNALGGSHGVPRVHYKGRQGDYYIMVMDMLGPSLWDVWNNNNPHMMSTEMVACIAIEAISILEKIHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLIRGRLPWQGYQGENKGFLVCKKKMATSPETLCCFCPQPFRQFVEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTEGAQKVGHKRGRLTIEEDDDEQPKKKVRMGMPATQWISIYNARRPMKQRYHYNVADVRLSQHIDKGNEDGLFISSVASCSNLWALIMDAGTGFTAQVYKLSSYFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSDSFPFKWINKKWREGFYVTAMTTASSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGYRITSTAATWDQTALVLSIPRRKPADETQETLRTSAFPSTHVKKVVVSTFSIYLIVFEWEI 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0058 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Aed10g0058 579 SMART serkin_6 38 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0058 579 MobiDBLite consensus disorder prediction 1 23 - -
Aed10g0058 579 CDD STKc_CK1 38 293 - -
Aed10g0058 579 Gene3D Transferase(Phosphotransferase) domain 1 8 340 - -
Aed10g0058 579 PANTHER - 15 553 - -
Aed10g0058 579 MobiDBLite consensus disorder prediction 1 32 - -
Aed10g0058 579 SUPERFAMILY Protein kinase-like (PK-like) 38 297 IPR011009 -
Aed10g0058 579 Pfam Protein kinase domain 88 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0058 579 PANTHER CASEIN KINASE-RELATED 15 553 - -
Aed10g0058 579 ProSiteProfiles Protein kinase domain profile. 38 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0058 Aed-Chr10 393094 400457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0058 98 293 MAP Kinase Kinase Kinase AT5G50180 25.126 3.94e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Aed10g0058 Pkinase 3.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0058 - - gmx:100800125 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g0058 10 393094 400457 Aed10g0058 10 393094 400457 ECH
Aed10g0058 10 393094 400457 Aed6g0983 6 13094178 13111217 PCT