Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0052 ATGGCCAAAGGATCATCGTCTTCAACGTCTTCAAAGACAAAATCCATGAAACTTTTTATATGCCTCTTCATTTTGATGCTCAACTTCCGCCTATCCAATGGAGATGAACAAGAAGTTGAGGTTCTATTATCCTTCAAAGCTTCCCTTCACGACCCACTTCACTTTCTCTCCAACTGGGTCAACACTTCCTCTGCTACTATCTGCAAGTGGCACGGCATAACCTGCGACAACAACAACGTTAACGCTGTGGTGCTTTCAGGAAAAAACATAACCGGCGAGGCTTCCTCTTCCATTTTTCAACTTCCCTACGTCACAAACCTCGACCTTTCCAATAATCAGTTTGTTGGGGGAATCACTTTTTTTAACCACCACTCTCTAAATTCTCTGTCTCCAATCCGTTACCTTAACCTCAGCAACAACAACCTCACGGGGTCTTTGCCTCAACCCTTGTTTTCCGTGCTTTTCTCAAACCTCGAAACTCTGGATCTCTCGAACAACATGTTTTCGGGGAACATACCCGATCAAATTGGATTGCTTTCCAGTTTAAGGTATCTCGATCTCGGAGGAAACGTTTTGGTGGGAAAGATTCCAAACTCCATCACCAACATGACCACTTTGGAATACCTCACGTTGGCTTCAAACCAGTTAGTGGGTAAGATACCTTCAGAAATCGGTGTAATGAAGAGCTTGAAGTGGATTTACTTTGGCTACAACAACCTTTCAGGTGAGATTCCAAGTAACATTGGAAAGTTACTCTCTTTGAATCACCTCGATCTTGTTTACAACAACCTCACTGGACCTATTCCTCAATCTCTCGGACACCTCACCGAGCTTCAGTATCTCTTTCTCTACCAAAACAAACTAAGTGGTCCAATTCCTGGGTCTATCTTTTATCTCAAAAAGCTAATCTCACTCGATCTAAGTGATAACTCTCTTTCCGGTGAGATTTCTGAGCGCGTGGTTCAGCTCCAGAGGCTGGAGATTCTCCACCTTTTCTCAAACAAGTTCAGTGGGAAGATTCCAAAGGGTGTTGCATCTCTGCCTCGGCTTCAGGTTCTTCAGCTATGGTCAAACGGATTAGAAGGTGAGATTCCCGAGGAGCTAGGGAAGCATAGCAACCTCAGTGTGTTGGACCTCTCCACCAACAACCTCACAGGGAAGATTCCAGATAGCCTGTGTTATTCTGGTAGTCTTTTCAAGCTTATCCTCTTCTCAAACTCTTTCGAAGGAGAAATCCCAAAGAGCTTAACCTCCTGCAGAAGCCTTCGCCGTGTGAGACTCCAAAACAACAGGTTCTCGGGGAAACTGTCTCCAGAGTTATCCACACTGCCTCAGATATACTTCTTGGATATCTCTAGCAACCAACTTTCTGGAAGAATCGATGACAGAGAATGGCACATGCCGTCGCTTCAAATGCTCAGTTTGGCTAACAACAACTTCTCAGGAGAAATTCCAAACTCTTTTGGAACTCAAAATCTTGAGGACTTGGACTTATCACATAACCAATTCTCAGGTTCTATTCCTATTGGTTTGTCAGAACTCGTGGAATTGAAGCTCAGGAATAACAAACTCTTGGGTAACATCCCTGAAGAAATATGCTCCTGCAAGAAGCTTGTTTCTTTAGACTTGGGTCACAACGAGCTCAGCGGTCAGATTCCGGTGAAACTCTCCGAGATGCCGGTTCTCGGCCTCCTCGACCTGTCGGAAAACCAACTCTCCGGCGAGATTCCACAGAATCTGGGAAGCGTGGAGTCTCTCGTTCAGGTAAACATATCACACAACCATTTTCGTGGAAGCTTACCTTCCACCGGCGCTTTCCTTGCCATCAACGCGAGTGCAGTCGCCGGCAACAGCCTCTGCGACCGCGACGGCGACGTTTCAAGCGGGTTGCCACCGTGCAAAAACAACAATCAGAACCCGACCTGGCTCTTCATCATGCTGTGTTTTCTAGTAGCGTTGGTTGCGTTCGCCGCAGCTTCTTTTATAGTCTTTTACGTTCGTAAGAGAAGGAACTTCTCGGAGATGCGAAGAGTGGAAAACGAAGACGGAACGTGGGAAGTGCAGTTCTTTGATTCCAAAGCCGCGAGGTTGATCAACGTAGAGGATGTTCTGTCGGCGGTTAAGGATGGAAAAGTCGTGTCCAAAGGAAGAAACTGGGTTTCATACGAAGGGAAGTGCATGGAGAATGACATGCAGTTCGTGGTGAAGGAAATTAATGATTTGAATTCTCTTCCAGTGAGTGTGTGGGAAGAGACTGTGAAGGTTGGGAAAGTTCGTCATCCTAATATCGTTAACCTTATTGCGACGTGTAGGTGTGGGAAGAGAGGGTACTTGGTCTACGAGCACGAGAAGGGGGAGAAACTAAGCGAAATTGTCAACACTTTGAGTTGGCAACGGCGTTGCAAAATTGCTTTTGGCGTTGCGAAAGCGCTTAAGTTCTTGCATTCTCAAGCTTCATCCATGGTTTTCGTCGGAGAGGTGTCACCGGATATAGTTTGGGTTGACCCTAAAGGCTTCCCTCGCCTTAAGGTCACCCCTCCCGTAATGCCGTGTTTGGATGCCAAGGGTTTCGTTTCTAATTCTCCCTACGTTGCTCAAGAGGCAATAGAGAGGAAAAAAGTGACAGAGAAGAGTGAGATATATGGGTTGGGAGTGATGCTGATTGAATTATTGACGGGAAGGAGCGCCCTGGACATAGAAGCTGATGGAGGCAGTGGCATGCATCAAAAGAGCATTGTGGAGTGGGCCAGGTATTGCTACACTGACTGTCATCTTGACACGTGGATAGATCCTGCGATGAAGGGTGGAGATGGTCAGAACGACATGGTGGAGATGATGAATCTGGCACTGCACTGTACCGCCACTGATCCCACCGCAAGGCCATGCGCAAGAGACGTACTCAAAGCCCTAGAGACTACTGTTCACAGAACCACTTTTTGTTGA 2943 0.4659 MAKGSSSSTSSKTKSMKLFICLFILMLNFRLSNGDEQEVEVLLSFKASLHDPLHFLSNWVNTSSATICKWHGITCDNNNVNAVVLSGKNITGEASSSIFQLPYVTNLDLSNNQFVGGITFFNHHSLNSLSPIRYLNLSNNNLTGSLPQPLFSVLFSNLETLDLSNNMFSGNIPDQIGLLSSLRYLDLGGNVLVGKIPNSITNMTTLEYLTLASNQLVGKIPSEIGVMKSLKWIYFGYNNLSGEIPSNIGKLLSLNHLDLVYNNLTGPIPQSLGHLTELQYLFLYQNKLSGPIPGSIFYLKKLISLDLSDNSLSGEISERVVQLQRLEILHLFSNKFSGKIPKGVASLPRLQVLQLWSNGLEGEIPEELGKHSNLSVLDLSTNNLTGKIPDSLCYSGSLFKLILFSNSFEGEIPKSLTSCRSLRRVRLQNNRFSGKLSPELSTLPQIYFLDISSNQLSGRIDDREWHMPSLQMLSLANNNFSGEIPNSFGTQNLEDLDLSHNQFSGSIPIGLSELVELKLRNNKLLGNIPEEICSCKKLVSLDLGHNELSGQIPVKLSEMPVLGLLDLSENQLSGEIPQNLGSVESLVQVNISHNHFRGSLPSTGAFLAINASAVAGNSLCDRDGDVSSGLPPCKNNNQNPTWLFIMLCFLVALVAFAAASFIVFYVRKRRNFSEMRRVENEDGTWEVQFFDSKAARLINVEDVLSAVKDGKVVSKGRNWVSYEGKCMENDMQFVVKEINDLNSLPVSVWEETVKVGKVRHPNIVNLIATCRCGKRGYLVYEHEKGEKLSEIVNTLSWQRRCKIAFGVAKALKFLHSQASSMVFVGEVSPDIVWVDPKGFPRLKVTPPVMPCLDAKGFVSNSPYVAQEAIERKKVTEKSEIYGLGVMLIELLTGRSALDIEADGGSGMHQKSIVEWARYCYTDCHLDTWIDPAMKGGDGQNDMVEMMNLALHCTATDPTARPCARDVLKALETTVHRTTFC 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0052 980 Gene3D Ribonuclease Inhibitor 37 152 IPR032675 -
Aed10g0052 980 Gene3D Ribonuclease Inhibitor 153 247 IPR032675 -
Aed10g0052 980 Gene3D Transferase(Phosphotransferase) domain 1 782 978 - -
Aed10g0052 980 ProSiteProfiles Protein kinase domain profile. 707 978 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0052 980 ProSiteProfiles Leucine-rich repeat profile. 157 179 IPR001611 GO:0005515
Aed10g0052 980 Gene3D Ribonuclease Inhibitor 248 326 IPR032675 -
Aed10g0052 980 Pfam Leucine rich repeat 348 407 IPR001611 GO:0005515
Aed10g0052 980 Pfam Leucine rich repeat 156 216 IPR001611 GO:0005515
Aed10g0052 980 ProSiteProfiles Leucine-rich repeat profile. 492 515 IPR001611 GO:0005515
Aed10g0052 980 SUPERFAMILY L domain-like 324 601 - -
Aed10g0052 980 SUPERFAMILY Protein kinase-like (PK-like) 691 974 IPR011009 -
Aed10g0052 980 Gene3D Ribonuclease Inhibitor 327 627 IPR032675 -
Aed10g0052 980 SUPERFAMILY L domain-like 35 358 - -
Aed10g0052 980 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 974 - -
Aed10g0052 980 Pfam Leucine rich repeat N-terminal domain 36 76 IPR013210 -
Aed10g0052 980 Pfam Protein kinase domain 716 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0052 980 PANTHER - 14 974 - -
Aed10g0052 980 Gene3D Phosphorylase Kinase; domain 1 671 781 - -
Aed10g0052 980 SMART LRR_typ_2 203 227 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 559 583 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 347 371 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 511 535 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 155 179 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 467 491 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 251 275 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 299 323 IPR003591 -
Aed10g0052 980 SMART LRR_typ_2 372 395 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0052 Aed-Chr10 356890 361445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0052 18 971 Receptor kinase-like Gene Family AT2G25790 51.963 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Aed10g0052 Pkinase 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0052 - - gmx:100777118 1687.55