LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g0034	ATGTGTAATAATAACTTCCTAAAGTTCAACAACCCCTTTAAGAACCACTGTTTCAGGCTGGTTCTTTCTCTCCCCTTCAATGTTCAATCCCAAGGCAAAGATGGTGAAGCACAGGACCTGCCACAACTCCCTCAAACCTTTCATCCAAGCAAGGGAACTGTAATAGCAGTGCTCTCCATAATGTTTGCCATAGCATTTCTCTTACTTTTCTATGTTAAGTTCTGCCGAGTCATCCCTCATGAACTTCTTATAGCCCAAACACAAATCTCCAAAACTTTCATGTTCGAGGTTCCTTCAAATCTAACCGAGGATCCAAACCTTGAAATCTTCGTTCAGAGAGAGCCATCTCATCGAGGGTCATCAAGAAGAGGCTTTTGGGACGTGGGCAAGTACAAGAAACAAGAACTACTTATTGGTGATAGTAGTAGTGGTTCTTCAAAGTGGAGCAACAAACCGGTTCACGTGATAAACCATAAGATAGTTATCTCCGATGCTTTTACGAGGAGTAGGTGGAGTGATCTTAATTCTTCGAACCTGTTGTCATTGAACAGTGAGATGCTTAATGATGCTTGCAGCACGAGATTCTGTTTCTGTCCTTTGGATTCCACCGACAGTGGAAAGTTTCATGCGACTTCGAGTTGTTCTAACGAGGACTCGTTTACGGCACTGAACCGGCCTGCTGGGAAGAGGTGCATGTCTGAGATTGCCAATGTTCCGAGGATCAGAGAATGTGTGACATCTAATGAGAAGTTGTGGTTGCTAATTGCGCGAAGAACGGTGCAATGGTTTGCAAAACAAGAAAGGAATTCCGTTGAATCGGAACACAAAACTCTGGCTTCAATTGTTTCATCAACGTAA	858	0.4324	MCNNNFLKFNNPFKNHCFRLVLSLPFNVQSQGKDGEAQDLPQLPQTFHPSKGTVIAVLSIMFAIAFLLLFYVKFCRVIPHELLIAQTQISKTFMFEVPSNLTEDPNLEIFVQREPSHRGSSRRGFWDVGKYKKQELLIGDSSSGSSKWSNKPVHVINHKIVISDAFTRSRWSDLNSSNLLSLNSEMLNDACSTRFCFCPLDSTDSGKFHATSSCSNEDSFTALNRPAGKRCMSEIANVPRIRECVTSNEKLWLLIARRTVQWFAKQERNSVESEHKTLASIVSST	285

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g0034	285	PANTHER	RING-H2 FINGER PROTEIN ATL4J	95	277	-	-
	Aed10g0034	285	PANTHER	E3 UBIQUITIN-PROTEIN LIGASE ATL42	95	277	-	-
	Aed10g0034	285	PANTHER	E3 UBIQUITIN-PROTEIN LIGASE ATL42	22	89	-	-
	Aed10g0034	285	PANTHER	RING-H2 FINGER PROTEIN ATL4J	22	89	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed10g0034	Aed-Chr10	241338	242456	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed10g0034	103	268	C3H Transcription Factor Family	AT2G20030	32.979	1.28e-17	80.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g0034	K10664		-	gmx:100816668	230.72