Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0031 ATGGAGAGGGTCATCGGCGGGAAGTTTAAGATTGGTCGCAAAATCGGAAGCGGTTCATTCGGAGAAATTTATATTGCCTCAAATATGGATACCTCTGAGATTGTCGCCATCAAGATGGAAAGCAAGAAAACCAAACATCCACAACTATTGTATGAAGCAAAGTTATATAGTATTCTTCAAGGAGAAAGTGGTATTCCAAGTATGAAGTGGTGTGGAACTGATGGAGACAATAATGTTCTAGTTATTGATCTTCTGGGACGGAGTCTTGAAGACTTTTTTGTCTACTGTGGGAGGAGGTTTTCATTAAAAACAGTTTTGATGTTGGCTGATCAGATGCTGACAAGAATAGAGTACATGCATTCCAAGGGATTTTTGCATAGAGATATCAAACCAGATAACTTCCTTATGGGTCTTGGAAGGAAATCAAATCAGGTTTATGTTATTGATTTTGGACTAGCAAAAAAATATAGGGACCCTAACACAAACAGGCATATTCCTTACAGAGAGAATAAAAGCTTAACAGGAACTGCACGCTATGCAAGTTGTAACACTCACCTGGGAATTGAACAAAGTTGTCGTGATGATTTGGAGTCTCTTGGCTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGCTACAAAAAAGGAAAAATATGACAACATTTGTGAGAAGAAATTATCAACTCCCATTGAGATGCTTTGCAAGTCACATCCTGTGGAGTTTGCTACTTACTTTCACTATTGCCAATCTTTGGCATTTGATCAACTCCCAGATTATGGATACTTGAAGCGCCTGTTTCATGATTTGTCCATAAAAGAAGGATATGATTCCGACTATATATTTGACTGGACCATCCTAAAACATCAGCAGGCACAACAGACAAGGAAACAAAATCAATCATCTCCTTCAACTGCAGTGCCTAGCAGTCTAGAACCAGTAGTTGTGGAAAACCATAAAGGAGTTAACGATTCAGCTCATGTCACTGGTGTAAATGTAAACAACAGTCCATCTACTTCGTCTGCCATACCCAAACCCTCTCCAGAAAAGTCCACAGCAACCTCAAACCTTGGTCGTGTATTTGGGAGTAATGCCCGTGTTTCGAGCAGCTGGATTCCTTCACTACGCCGAATTTCTTCTGCCAAATAG 1167 0.401 MERVIGGKFKIGRKIGSGSFGEIYIASNMDTSEIVAIKMESKKTKHPQLLYEAKLYSILQGESGIPSMKWCGTDGDNNVLVIDLLGRSLEDFFVYCGRRFSLKTVLMLADQMLTRIEYMHSKGFLHRDIKPDNFLMGLGRKSNQVYVIDFGLAKKYRDPNTNRHIPYRENKSLTGTARYASCNTHLGIEQSCRDDLESLGYVLMYFLRGSLPWQGLKAATKKEKYDNICEKKLSTPIEMLCKSHPVEFATYFHYCQSLAFDQLPDYGYLKRLFHDLSIKEGYDSDYIFDWTILKHQQAQQTRKQNQSSPSTAVPSSLEPVVVENHKGVNDSAHVTGVNVNNSPSTSSAIPKPSPEKSTATSNLGRVFGSNARVSSSWIPSLRRISSAK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0031 388 Gene3D Transferase(Phosphotransferase) domain 1 1 332 - -
Aed10g0031 388 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 349 - -
Aed10g0031 388 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0031 388 PANTHER CASEIN KINASE-RELATED 1 349 - -
Aed10g0031 388 MobiDBLite consensus disorder prediction 331 365 - -
Aed10g0031 388 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aed10g0031 388 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Aed10g0031 388 Pfam Protein kinase domain 10 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0031 388 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed10g0031 388 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0031 Aed-Chr10 210614 221867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0031 9 244 AGC Kinase Gene Family AT3G08720 26.250 8.93e-16 76.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Aed10g0031 Pkinase 2.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0031 K08960 K08959 gmx:100792736 707.212