Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0021 ATGGGGGACGAATCGTCGAAAAATAAAGTGAAGTTCCTATGCAGCTACGGTGGGAAGGTCCTTCAACGACCGTCGGATGGGGTGCTTCGATATGTGGGTGGGGAAACACGTGTGGTTAGCGTGGAACGTGACATAACATTTAGTGGTATAATGAAGAAGGTGAATAGCATGGCAATGACAATGACAGAAGGAGAGACGGTTTTAAAATACCAATTGATAACAGAAGATCTGGACGCATTGGTAACGGTGAGAACGGAGGAAGACGTAAAGCACATGATAGAAGAACACGATCGACATCAAACAGGAGCCTTACTCCGTGCATTCCTCTTCCCTCCTTCCAAGCCTACGCCTATGGCTTTGATTGCCACATCCGAACCCAATGTTTATGTCTTTGAACAACGTTATATTGACGTCATTAATGGGATCATCCGAACAAGCTCGAGGACCACTGCCATCGCCAAGGACTCTGCCTGA 474 0.4684 MGDESSKNKVKFLCSYGGKVLQRPSDGVLRYVGGETRVVSVERDITFSGIMKKVNSMAMTMTEGETVLKYQLITEDLDALVTVRTEEDVKHMIEEHDRHQTGALLRAFLFPPSKPTPMALIATSEPNVYVFEQRYIDVINGIIRTSSRTTAIAKDSA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0021 157 SMART PB1_new 24 112 IPR000270 GO:0005515
Aed10g0021 157 SUPERFAMILY CAD & PB1 domains 25 115 - -
Aed10g0021 157 Pfam PB1 domain 29 111 IPR000270 GO:0005515
Aed10g0021 157 Gene3D - 30 111 - -
Aed10g0021 157 PANTHER OS05G0427100 PROTEIN-RELATED 4 146 - -
Aed10g0021 157 CDD PB1_UP2 13 110 - -
Aed10g0021 157 PANTHER OS05G0427100 PROTEIN 4 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0021 Aed-Chr10 149671 150531 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0021 8 143 MAP Kinase Kinase Kinase AT5G57610 44.286 1.21e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0021 - - gmx:100800353 207.994