Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0012 ATGGCTCTGATCCTGCACGCAACCAAAGCAAACAAGAATGTTTTTAAGACTTTGATCGCGGCAGAGTACAGTGGCGTCCAAGTGGAATTGGCTCCTAATTTCGAGATGGGTGTCTCCAATAAAACTCCTGAGTTCCTGAAGATGAATCCAATTGGAAAGGTTCCTGTCTTGGAAACGCCACATGGTTCTATCTTTGAGAGCAATGCTATTGCTCGTTACGTTGCACGACTCAAGGGTGACAACGCTTTGTTCTCATCATCTGCCATTGATAATGCCCACATTGACCAGTGGATTGATTTTTCATCCTTGGAGATTGATGCTAATATTATGAAATTGTACCTTCCAAGACTTGGATATGCTCCATACCTCCCTCCAGTCGAGGAGGGTGCAAATTCTGCGCTGAAGAGAGCATTTGGGGCCTTGAACACCCATCTCGCCTCCAATACTTACCTGGTTGGCCATTCTGTTACCCTTGCTGACATCATAACGACATGCATCTTGTATTTAGGGTTCAGCCAGCTCTTAGTTAAGAGCTTCACCTCGGAGTTCCCTCATGTTGAGAGATACTTCTGGACATTGGTCAACCAACCTAACTTCCGAAAGATATTAGGTCAGGTTAAGCAAACCGATGCTCTTCCACCTATTCCATCCGCAAAGAAGCCTTCCCAGTCCAAGCCTAAGGATGAGCCAAAAAAAGCAGTGGCTAAACCAGAGCCAGTAGCAGAAGCAGAGGAGGAGGCACCCAAGCCCAAGCCCAAGAATCCTCTTGATCTTCTTCCTCCAAGCAAGATGATATTAGATGAGTGGAAAAGGCTCTACTCAAACACCAAGACCAACTTCCGGGAGGTTGCAATCAAAGGATTTTGGGACATGTACGATCCGGAGGGATATTCTTTGTGGTTCTGTGATTACAAATACAATGATGAGAACACAGTTTCGTTTGTTACATTAAACAAGGTAGGTGGATTTCTGCAGAGGATGGATCTGGTTCGCAAGCATGCATTTGGAAAGATGCTGGTGATTGGATCACAGGCACCATTTAAGGTGAAGGGCTTGTGGCTTTTCCGCGGACAAGAGATTCCACAATTTGTGATTGATGAATGCTATGATATGGAGCTCTACGACTGGACCAAGGTCGACATCTCTGATGAAACTCAGAAAGAGCGCGTCAGTCAGATGATCGAGGATTATGAACCATTCGAGGGAGAGTCTCTTTTGGATGCTAAGTGCTTTAAGTGA 1239 0.4544 MALILHATKANKNVFKTLIAAEYSGVQVELAPNFEMGVSNKTPEFLKMNPIGKVPVLETPHGSIFESNAIARYVARLKGDNALFSSSAIDNAHIDQWIDFSSLEIDANIMKLYLPRLGYAPYLPPVEEGANSALKRAFGALNTHLASNTYLVGHSVTLADIITTCILYLGFSQLLVKSFTSEFPHVERYFWTLVNQPNFRKILGQVKQTDALPPIPSAKKPSQSKPKDEPKKAVAKPEPVAEAEEEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLVRKHAFGKMLVIGSQAPFKVKGLWLFRGQEIPQFVIDECYDMELYDWTKVDISDETQKERVSQMIEDYEPFEGESLLDAKCFK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0012 412 SFLD Glutathione Transferase (cytosolic) 5 190 IPR040079 -
Aed10g0012 412 SMART EF1G_2 251 359 IPR001662 GO:0003746|GO:0006414
Aed10g0012 412 CDD GST_N_EF1Bgamma 5 77 - -
Aed10g0012 412 SUPERFAMILY GST C-terminal domain-like 73 209 IPR036282 -
Aed10g0012 412 PANTHER - 1 412 - -
Aed10g0012 412 SFLD Main (cytGST) 5 190 - -
Aed10g0012 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Aed10g0012 412 SUPERFAMILY eEF1-gamma domain 252 412 IPR036433 GO:0003746|GO:0006414
Aed10g0012 412 CDD GST_C_EF1Bgamma_like 90 210 - -
Aed10g0012 412 Pfam Glutathione S-transferase, C-terminal domain 130 197 IPR004046 -
Aed10g0012 412 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 252 412 IPR036433 GO:0003746|GO:0006414
Aed10g0012 412 Pfam Elongation factor 1 gamma, conserved domain 251 359 IPR001662 GO:0003746|GO:0006414
Aed10g0012 412 SUPERFAMILY Thioredoxin-like 2 83 IPR036249 -
Aed10g0012 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 222 IPR010987 -
Aed10g0012 412 MobiDBLite consensus disorder prediction 211 259 - -
Aed10g0012 412 Gene3D - 80 212 - -
Aed10g0012 412 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 252 412 IPR001662 GO:0003746|GO:0006414
Aed10g0012 412 MobiDBLite consensus disorder prediction 222 252 - -
Aed10g0012 412 Pfam Glutathione S-transferase, N-terminal domain 10 76 IPR004045 -
Aed10g0012 412 Gene3D Glutaredoxin 1 74 - -
Aed10g0012 412 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 412 IPR044628 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0012 Aed-Chr10 103630 105890 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0012 1 412 Eukaryotic Initiation Factors Gene Family AT1G57720 74.334 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0012 K03233 - gmx:100795680 724.931