Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g0001 ATGGGTCGGAATCAGAGGGAGAGGGAGGAGGGAGGAGGAGAGAAGCACGCGGGGCTGTTGAGATTGGCCCAAATCGTAACATATTTGGTGGTGTTTGCGGGAGGAGTGGTGATTGGTCTGACGACAAGCTCTCACATTAATAGCCATTTCATATCGCAGCCTTACCAGTACATATCGGTGAGTAATGTTCCATCTCCTCCTCCTCCGCTGCAGCAGGACGAGCCCCCTAACTGTAACTCAGGCTCAGCTCTGGACATGGACATGGATATGGATGCCTTCCTTCATCCACTGAATCTCACCCACAGGCTCTCTGACGAGGAGCTTTTCTGGAGGGCTTCCTTGATTCCGAAGAAAGAAGAATACCCTTACAGGAGAGTCCCGAAGGTCGCCTTCATGTTTCTCACTAGGGGTCCCCTTCCCATGTTGCCCCTCTGGGAAAGATTCTTCCAAGGTGCTCACCCCTCTCTCTTCAACATATACATCCACGCCCCTCCCCTCTACCGTCTCAACGTCTCCCACTCTTCCCCTTTCTATTCCCGCAACATCCCCAGCCAGGATGTTTCATGGGGTACCGTTACTCTTGCTGATGCTGAGAGGCGCCTTTTAGCCAATGCTCTCCTCGAATTTTCCAATCAGCGCTTTGTTCTCCTTTCCGAGAGTTGCATCCCTGTCTACAACTTCCCTACTGTTTACCGTTATCTCACTGATTCTTCCCACAGCTTTGTTGAATCTTACGATGACCCTACCCGTTATGGCCGCGGTCGCTACAGTCGCAATATGCTTCCTCATATTCAACTTAGACACTGGCGTAAAGGCTCTCAGTGGTTTGAACTCAACCGTCCTCTCGCCGTTTATATTGTCTCTGACACCAAATATTTTTCCCTCTTCCGCAAATACTGTAAGCCTGCTTGCTACCCTGATGAACATTACATTCCTACCTTCCTCAACATGTTCCATGGTTCGCTTAATTCTAACAGAACAGTCACATGGGTTGACTGGTCAATGCTGGGTCCTCATCCCGCAACCTATGGGAGAGCCAATATTACTGCCGCTTTTATACAGTCTATAAGGAACAATGGATCTCTTTGTCGATATAATTCAGAGATGACCTCCATTTGTTACCTTTTTGCTCGCAAGTTTGATCCAAGTGCACTCGAGCCCTTGCTTAGCCTTTCTTCAGAAAAACTGCATTTTATTCCTTCGAAGAAGGAATCCATCAATACATCAAATTTTATCTTCTGTGTCTCAATTCCTCCTTGTGGTTCGCATTGGCAGAAGACACAAACTACCTCCAAATTTTCAGCTTTCAAAAGACAGAATACAGCTATGGCCCAGCTTGAGGCATCTATGATTCAGGAATTGGGGCAGCAAAAGCCTGCCTTTAATCTGCCTTCTAAAATATCATGTAAAGTGGTCAATGTTCATCTTCGAGCTGAACCTGAAATAGATGAGGTATACGCACAGATAACTTTGCTTCCTGAAGCAGATCAAAGTGAGGTGACGAGCCCTGACGATACACTCACTGCTTCTGACACTGCCACTCATGGAGGTTTCTCTGTTCTTCGAAGACATGCAGATAATTGTATTCCACCGCTGGTTAGTAATTTTTATCTTTCTGAAAATCATTGGACACACTTGTTCATGATCATATGTGGCGTTTGGTTTGCGGAACTATTTTCTGTTTTCATTTTTTATTTCCATTTTCTGAAAATAGTTTTCATTTACGGTTTTTTAAGATTTAGAGAATGTGTTTGGTTTGACTAA 1764 0.4552 MGRNQREREEGGGEKHAGLLRLAQIVTYLVVFAGGVVIGLTTSSHINSHFISQPYQYISVSNVPSPPPPLQQDEPPNCNSGSALDMDMDMDAFLHPLNLTHRLSDEELFWRASLIPKKEEYPYRRVPKVAFMFLTRGPLPMLPLWERFFQGAHPSLFNIYIHAPPLYRLNVSHSSPFYSRNIPSQDVSWGTVTLADAERRLLANALLEFSNQRFVLLSESCIPVYNFPTVYRYLTDSSHSFVESYDDPTRYGRGRYSRNMLPHIQLRHWRKGSQWFELNRPLAVYIVSDTKYFSLFRKYCKPACYPDEHYIPTFLNMFHGSLNSNRTVTWVDWSMLGPHPATYGRANITAAFIQSIRNNGSLCRYNSEMTSICYLFARKFDPSALEPLLSLSSEKLHFIPSKKESINTSNFIFCVSIPPCGSHWQKTQTTSKFSAFKRQNTAMAQLEASMIQELGQQKPAFNLPSKISCKVVNVHLRAEPEIDEVYAQITLLPEADQSEVTSPDDTLTASDTATHGGFSVLRRHADNCIPPLVSNFYLSENHWTHLFMIICGVWFAELFSVFIFYFHFLKIVFIYGFLRFRECVWFD 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g0001 587 PANTHER OS08G0110400 PROTEIN 17 394 - -
Aed10g0001 587 Gene3D - 504 546 IPR015300 -
Aed10g0001 587 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 17 394 IPR044174 GO:0016757
Aed10g0001 587 Pfam Core-2/I-Branching enzyme 129 357 IPR003406 GO:0016020|GO:0016757
Aed10g0001 587 SUPERFAMILY DNA-binding pseudobarrel domain 506 533 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g0001 Aed-Chr10 19738 22679 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g0001 443 547 B3 DNA Binding Superfamily AT1G59750 58.333 2.21e-36 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g0001 - - gmx:100796634 657.521