Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g03045 ATGCTGCCGGAAATCGAGGCGTTCGAATTCGAGAGAAGCGCGGGGGCGGCGGAAGATATGAGGAAGGTGTCAAGCGCGGCGGAGGTGGAGGTGAAGGAGCTGAATGAGCTGCCGGAGGAGTGGCGAAGGGCGAGGCTGGCGTGGCTGTGCAAGGACCTTCCGGCTCACAAGTCGACGGCTGTGAAGATACTGAATGGGCAGAGGAAATGGATGAGGCAGGAAGATGCCACGTATCTCGCCGTCCATTGCATGCGCATTCGCGAGAATGAAACTGCTTTTAGGGTATACAAGTGGATGATGCAACAGAGTTGGTACCGATTTGATTTTGCTCTTGCCACTAAGCTAGCTGATTATCTTGGTAGAGACCGAAAGTTTTCAAAGTGCCGCGAGGTTGTTTGGATGAAGCATGCAGCATTTACAATCGATTCTGTAGATAAAGAACGGATAGACGAAATAAGGGAAGAGATGGTACGTGCCGGAATTGAGCAGGGAGGGGAGGTGCTAATATCCATCTTGAGGGTTTGTGCAAAGGTGGGGGACGCGGAGGAAGCTGAGAAGACTTGGTCCAAACTTCTTCAGCTTGAGATTGATCCCCCGCCTCATGCGTTTGTGTATAAAATGGAAGTCTACTCGAAGGTTGGTATGCCTAAGAAGTCTTTGGAGATATTTAAAGAGATGCAGGAGAAACTAGAGACAACAAGTGCTGCAGCATATAACAAAATAATAGAGATACTATGCAAAGCACAAGAATTGGAATCTGCGGAATCCATTATGACAGAATTTTTGAATAGTGGTTTGAAGCCACTGACACCATCTTATATTAGTTTACTAAACATGTACTACAATTTGGAATTACATGATAAACTCGAAGAGGCATTCTTCCAGTGCCAGGAGAAATGTCGTCATAGCTGTACTGTATACAGTATATATTTGGATTCATTGGTGAAGGTTGGTAATCTTGAAAAGGCTGAGAATATATTTAACCAAATGAATCGCGATGGATCTGTCGGTGTTAATGGCCGATCATGCAACATTATCTTGAGTGGATACCTGTCCTCTGGAAATCACTTGAAGGCTGCAAAGATCTATGACTTCATGTGCCTAAAAAAGTACGATATTGAAGCTCCCTTGATGGAAAAGCTTGACCATCTCTTGAGCTTGAATAGGAAAGTTGTTAAAAGACCAATGAGCCTGAAGCTAACCAAAGAGCAGAGGGAAATATTAATTGGGTTGCTTTTGGGTGGTTTGCAGATTGATTCTGATGACCAAAGGAAGAATCACATTATCCGTTTCGATTTTAAGGTTAATTCTAGCTACCATTATGTCCTGAAGAGTCATATACATCGCCAGTTCTATGAGTGGCTGCATCCTTCATTTAAGCCGAGTGGGGACATTGACAATGAGAAGATACCAAACAAGTTTTGTACCATTGCGAGCTCTCAATTTGGCTTCTATGCAGAACAGTTTTGGTCAAAGGGTCAGCCAACGATTCCAACACTTGTCCATAGGTGGTTGTCACCATGTGTTCTTGCATACTGGTACATGTATGGAGGCTGTCGTCCTTGGACTGTAAGGAGGAATTTGGGTTTCGTGGTTATTTCAAATCAAAAGAGCAAGGATTCACTATTTTTCAGTTTTCACACTACTTGCGCTTCTTTGCCATTAAGGTTGGTCGAAGATTCTAGAAGACGGAGACGCAGAGGCAGGGGCAGAAAGGGAAGAATAGTGATTGAACTCTTCGATGACGTGGTTCCCAAAACCGCTGAGAATTTTAGGGCTCTCTGCATTGGCAACAAAGGCATTGCTCCTAACACTCATGTGCCCCTTCATTTCAAGGGTTCTCGCTTTCACCGTGTTATTAAGGGCTTTATGATCCAAGGAGGTGATATATCTGCTGGAGATGGTACTGGAGGAGAGTCGATTTATGGACTGAAGTTTGAAGATGAAAATTTTGAGTTGAAGCATGAAAGGAAAGGGATGTTATCCATGGCGAATTGTGGTCCCAATACAAATGGGTCTCAATTTTTTATTACAACTACCCGAACTCCTCATCTAGACGGCAAACATGTTGTATTTGGGAAGGTAGTCAAAGGAATGGGAGTAGTCCGCTCAGTTGAGCATGTGACAACTGGAGATAATGATTGTCCTACACTTGATGTTAAAATCGTGGATTGTGGAGAAATTCCTGAAGGAGAAGATGATGGAATACTTGACTTTTTCAAGGATGGTGATACTTTCCCTGATTGGCCAGCAGACCTTGACGAGAGACCTGATGAGCTTCAGTGGTGGATGAATGCTGTAGACTCTATTAAAACTTTTGGAAATGGGTATTACAAGAAACAAGACTATAAAATGGCTCAAAGAAAGTATCGCAAGGCTTTGCGCTACTTGGATGTTTGTTGGGAGAAAGAAGGGATTGATGGAGAGAAAAGCATAGCCTTGAGGAAAACTAAGTCTCAAATTTTTACAAACAGTTCTGCCTGTAAATTAAAATTAGGAGATCTTAAAGGAGCATTATTCGATGCTGAGTTTGCACTGCGTGAAGAGGACAACAATGTCAAAGCATTATTCCGGCAAGGACAGGCACATATGGCACTCCATGACATAGATGCTGCAGTTGAAAGCTTTAAAAATGCACTGGTCTTAGAGCCAAATGATGCTGGGATTAAGAAGGAACTTGCTGCTGCCAGGAAGAAGGTTGCTGATAGGCCAAGGCTCATCTTCAAGGATGGAAAGCTGCATGGAATGCAAAAGATACTATCTTGA 2766 0.4342 MLPEIEAFEFERSAGAAEDMRKVSSAAEVEVKELNELPEEWRRARLAWLCKDLPAHKSTAVKILNGQRKWMRQEDATYLAVHCMRIRENETAFRVYKWMMQQSWYRFDFALATKLADYLGRDRKFSKCREVVWMKHAAFTIDSVDKERIDEIREEMVRAGIEQGGEVLISILRVCAKVGDAEEAEKTWSKLLQLEIDPPPHAFVYKMEVYSKVGMPKKSLEIFKEMQEKLETTSAAAYNKIIEILCKAQELESAESIMTEFLNSGLKPLTPSYISLLNMYYNLELHDKLEEAFFQCQEKCRHSCTVYSIYLDSLVKVGNLEKAENIFNQMNRDGSVGVNGRSCNIILSGYLSSGNHLKAAKIYDFMCLKKYDIEAPLMEKLDHLLSLNRKVVKRPMSLKLTKEQREILIGLLLGGLQIDSDDQRKNHIIRFDFKVNSSYHYVLKSHIHRQFYEWLHPSFKPSGDIDNEKIPNKFCTIASSQFGFYAEQFWSKGQPTIPTLVHRWLSPCVLAYWYMYGGCRPWTVRRNLGFVVISNQKSKDSLFFSFHTTCASLPLRLVEDSRRRRRRGRGRKGRIVIELFDDVVPKTAENFRALCIGNKGIAPNTHVPLHFKGSRFHRVIKGFMIQGGDISAGDGTGGESIYGLKFEDENFELKHERKGMLSMANCGPNTNGSQFFITTTRTPHLDGKHVVFGKVVKGMGVVRSVEHVTTGDNDCPTLDVKIVDCGEIPEGEDDGILDFFKDGDTFPDWPADLDERPDELQWWMNAVDSIKTFGNGYYKKQDYKMAQRKYRKALRYLDVCWEKEGIDGEKSIALRKTKSQIFTNSSACKLKLGDLKGALFDAEFALREEDNNVKALFRQGQAHMALHDIDAAVESFKNALVLEPNDAGIKKELAAARKKVADRPRLIFKDGKLHGMQKILS 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g03045 921 Coils Coil 17 37 - -
Adu10g03045 921 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 573 727 IPR002130 GO:0000413|GO:0003755
Adu10g03045 921 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN OTP51, CHLOROPLASTIC 7 131 - -
Adu10g03045 921 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN OTP51, CHLOROPLASTIC 141 520 - -
Adu10g03045 921 Gene3D - 556 734 IPR029000 -
Adu10g03045 921 SUPERFAMILY Homing endonucleases 396 522 IPR027434 -
Adu10g03045 921 Gene3D Tetratricopeptide repeat domain 763 908 IPR011990 GO:0005515
Adu10g03045 921 SMART tpr_5 853 886 IPR019734 GO:0005515
Adu10g03045 921 SMART tpr_5 165 198 IPR019734 GO:0005515
Adu10g03045 921 SMART tpr_5 767 800 IPR019734 GO:0005515
Adu10g03045 921 SMART tpr_5 819 852 IPR019734 GO:0005515
Adu10g03045 921 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 572 726 IPR002130 GO:0000413|GO:0003755
Adu10g03045 921 SUPERFAMILY HCP-like 176 368 - -
Adu10g03045 921 SUPERFAMILY Cyclophilin-like 571 730 IPR029000 -
Adu10g03045 921 CDD cyclophilin_ABH_like 575 726 - -
Adu10g03045 921 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 303 337 IPR002885 -
Adu10g03045 921 Gene3D Tetratricopeptide repeat domain 296 380 IPR011990 GO:0005515
Adu10g03045 921 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 611 628 IPR020892 GO:0003755|GO:0006457
Adu10g03045 921 ProSiteProfiles TPR repeat profile. 853 886 IPR019734 GO:0005515
Adu10g03045 921 Pfam Tetratricopeptide repeat 854 886 IPR013105 -
Adu10g03045 921 Pfam PPR repeat 342 367 IPR002885 -
Adu10g03045 921 Pfam PPR repeat 306 334 IPR002885 -
Adu10g03045 921 Pfam PPR repeat 208 229 IPR002885 -
Adu10g03045 921 Gene3D Homing endonucleases 381 494 IPR027434 -
Adu10g03045 921 Gene3D Tetratricopeptide repeat domain 47 207 IPR011990 GO:0005515
Adu10g03045 921 Gene3D Tetratricopeptide repeat domain 208 295 IPR011990 GO:0005515
Adu10g03045 921 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 579 594 IPR002130 GO:0000413|GO:0003755
Adu10g03045 921 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 659 674 IPR002130 GO:0000413|GO:0003755
Adu10g03045 921 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 674 686 IPR002130 GO:0000413|GO:0003755
Adu10g03045 921 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 687 702 IPR002130 GO:0000413|GO:0003755
Adu10g03045 921 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 616 628 IPR002130 GO:0000413|GO:0003755
Adu10g03045 921 Pfam LAGLIDADG DNA endonuclease family 405 520 IPR004860 GO:0004519
Adu10g03045 921 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 234 268 IPR002885 -
Adu10g03045 921 SUPERFAMILY TPR-like 763 900 IPR011990 GO:0005515
Adu10g03045 921 TIGRFAM PPR: pentatricopeptide repeat domain 306 334 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g03045 Adu-Chr10 106443476 106450631 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g03045 555 725 U-box Gene Family AT5G67530 39.773 1.08e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g03045 K05864 - aip:107623739 743.036