Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g03016 ATGCGCCATCGCAACGTTCCCCAATCCATGGACCTCGAGATGGAAGCCACAGGATTCGAATCCGAAGAAGAAGAAGAGGAAGAAGACGATGAAGACGACGAAGAAGAACAACATCCTCAAACCAATAACAACTACAACAACCCTTCTTCCTCCAACTCAAACCCTAACAGCACCACTGAGCCCTACATCGGCATGGAGTTCGACTCCGAGCTATCCGCACGCGCCTTCTACAACGCCTACGCGCGTCGCATCGGCTTCAGCACGCGCGTCAGCGTTTGTCTCCGCTCCCGAAAGGACTCCTCCGTTATCCGCCGCCGTGTTGTATGCTCCCGAGAGGGCTTCCGCCGCAACCCTGAGAACCACGACCCTAAGCGCCACCGCTCCGTGACACGTGTCGGCTGCAAAGCTCAGATCACCGTCAAGAAGAAGGGCCCACTCGGCAAGTGGTACATCTCCAAGTTCATCAAAGACCACAACCACGACCTCGTCCCTCCCGATAGGGTCCACTGCCTCCGCTCCCACCGCCGCGTCAACGGTGCCGCCCGCAGCCTCATCGATACTCTTCACGCAGCTGGCATGGGCGCTGCCGAGGTCATGACGGTACTCATCAAGGAGTCTGGCGGCATCGACAACGTCGGCTTCACAAAAGTTGACTGCCAGAACTACATGACGTCATCTTCTAAGAGGAGCCTCGGGAGTGGGAACCAGCTTGTCTTCGATTTCTTGAAAAAGATGAGTGAGGAGGATCCTTCTGGATTCTTCTACTCCTTCCAGGGCGATTCGGAGAGTTCCTCAGGTAACATCTTTTGGGCTGATGGCAATGCCAGGAGGAATTATGAATATTTTGGAGATGCTGTTGTTTTCGATATGGCGTATCGGAGGGGACGCTATAAAGTACCCTTTGCGCCTTTTACTGGATGGAACCATCACGGGCAGCCGGTGCTCTTCGGCTGCGCCCTGATGCTCAACGAATCCGAGGCGTCCTTCGTGTGGCTTTTTACCACATGGCTTCAAGCAATGTACGGCCGGCATCCTGTGTCCATTACTACTGATCAGGACAGGATAATTCACTCTGCTGTCTTGCAGGTTTTCCCAGATACTCGTCACCGGTTCTCCAAGTGGGACGTGTTCGGTGAGGTTCAGGAGAGGCTGATTGATGTGTGTGGAGTGCATCCTGAGTTTGAGTCTGAGTTTCGACGGTGCGTGAACTCGGCGGAGACAGTTGATGAGTTTGAGTCTAGCTGGAAGTTCCTTGTTGGGAGGTATGAGCTTCTGGATAATGAATGGCTTCAGTTGATGTACAGGAATCGCCATCAATGGGTGCCTGTTTATCTCCGCGACACCTTTTTTGGCGATTTGTCTGCCATCCATGGGAGTGATACTAGCAGCTCGTACTTTGATGGGTTTATTAATGCCACGACTACCGTCCAGACGCTGATTAAGCAGTATGAGAAAGGAGTCGCGGATCGATATGAGAAGGAAGTGAAGGAGGATTATGATACGCTGAACACCGCACCGGTTTTGAGAACTCCTTCTCCAATGGAAAAACAAGCGGCTGGTCTCTACACGAGGAAAATATTTGCAAGGTTCCAAGAGGAATTGGTTGAGACCCTTGCATATGCTGCTACGTTGATGGATGATGCAAGATCACAAGCTACTTATCGGGTGGCGAAGTACGGGGAGGAGAATAGAGCGCATTTTGTTAGGTTCAATGTCTTCAGGAAGAAAGCTAGCTGCAGCTGCCAAATGTTTGAGTTTGCGGGTCTTGTCTGTAGGCACATATTAGCAGTTTTTAGGGTCATCAATATTCTTACGCTTCCGTCCCATTACATCTTGAAAAGGTGGACGAGAAACGCAAAGAGTATCTTGTTGGATAAAGGAGCTCGAGAATTGCAAAATAGTCTGGAAGAGTGTTACTCCTCTCGCTACGATAGTTTGAGCCGGGAAATTATGAGTTATGTAGAAATGGGGGCAGAATCATCGGATACTTATAGCGTTGCGCTGAATGGTCTACGTGAGGCTGCGAAAAAGGTTGCGGATGCAAAGAAACCTCGTCCAGCTCCCGTGCAAAGTACTTCAGATAATAATGAAAACCATGAGAGTAGTCAATCTAGTGATACAGATCAGGATAAGAAAATTCAAGAGTTGACTACTGAGTTAGAGGGTGCTCGGCAGCGATGTGAATCGTATAGGCAAAACCTGTTTGGCTTACTAAAAAATATGGAGGAGCAGAAGTTAAAAATATCTGTTAAGGCTCAGAGTGTTAGGCTAAATCTAGGAAGTGAATTGGTAGCTGAAGAAAGTAAGTAG 2310 0.4965 MRHRNVPQSMDLEMEATGFESEEEEEEEDDEDDEEEQHPQTNNNYNNPSSSNSNPNSTTEPYIGMEFDSELSARAFYNAYARRIGFSTRVSVCLRSRKDSSVIRRRVVCSREGFRRNPENHDPKRHRSVTRVGCKAQITVKKKGPLGKWYISKFIKDHNHDLVPPDRVHCLRSHRRVNGAARSLIDTLHAAGMGAAEVMTVLIKESGGIDNVGFTKVDCQNYMTSSSKRSLGSGNQLVFDFLKKMSEEDPSGFFYSFQGDSESSSGNIFWADGNARRNYEYFGDAVVFDMAYRRGRYKVPFAPFTGWNHHGQPVLFGCALMLNESEASFVWLFTTWLQAMYGRHPVSITTDQDRIIHSAVLQVFPDTRHRFSKWDVFGEVQERLIDVCGVHPEFESEFRRCVNSAETVDEFESSWKFLVGRYELLDNEWLQLMYRNRHQWVPVYLRDTFFGDLSAIHGSDTSSSYFDGFINATTTVQTLIKQYEKGVADRYEKEVKEDYDTLNTAPVLRTPSPMEKQAAGLYTRKIFARFQEELVETLAYAATLMDDARSQATYRVAKYGEENRAHFVRFNVFRKKASCSCQMFEFAGLVCRHILAVFRVINILTLPSHYILKRWTRNAKSILLDKGARELQNSLEECYSSRYDSLSREIMSYVEMGAESSDTYSVALNGLREAAKKVADAKKPRPAPVQSTSDNNENHESSQSSDTDQDKKIQELTTELEGARQRCESYRQNLFGLLKNMEEQKLKISVKAQSVRLNLGSELVAEESK 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g03016 769 Pfam SWIM zinc finger 576 601 IPR007527 GO:0008270
Adu10g03016 769 MobiDBLite consensus disorder prediction 16 37 - -
Adu10g03016 769 MobiDBLite consensus disorder prediction 1 62 - -
Adu10g03016 769 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 51 699 IPR031052 GO:0006355
Adu10g03016 769 Coils Coil 713 733 - -
Adu10g03016 769 MobiDBLite consensus disorder prediction 40 62 - -
Adu10g03016 769 Pfam FAR1 DNA-binding domain 76 164 IPR004330 -
Adu10g03016 769 Pfam MULE transposase domain 286 375 IPR018289 -
Adu10g03016 769 MobiDBLite consensus disorder prediction 677 712 - -
Adu10g03016 769 ProSiteProfiles Zinc finger SWIM-type profile. 570 602 IPR007527 GO:0008270
Adu10g03016 769 SMART 26again6 577 604 IPR006564 GO:0008270
Adu10g03016 769 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 51 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g03016 Adu-Chr10 106203571 106209103 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Adu10g03016 MULE 2.9e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g03016 - - qsu:112029984 975.696