Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g03002 ATGGAATCTGTTACCTCAGCCCAGAACACCAACCAACCCAAGGAAACACCGTTCCCACTATTCCCACCTGGAATCCCAATCCCTACGACAACCATAGAAAAAGCCGTAACGGCCACCACCACCGCCACCGCCACCAACGTTCCAACGCCGTTTCTCATAATACCCAAACACGAACCCGTTGAAGAATGCACCACCCCCATCCCTACCTCTAACAATCAAGACGTCAAACCTATATTCCCAAATGCCCCTCGCCGCGAAACCCTACCTGCACCTGTAACTGCACCTGCAACTGCACCTCATTCAGCCACCTCCTGCGACCCAAGCGACAACGCAAATGGCCTATACGAAGAGTTCAACCGAGTCTCTCAGCTCTTCCGTACCGCTTTCGCCGAGCAGCAGCAGCACCAGCTTCGAGCATCTCAGCAAATGGATTCCTCAAACGACCTCGTTTTGGACCCTAATTCGGGGGCAATTGTTCCTGTGCCTCCTCCGCAGGAATACGGGGGTCATTGGAATGGAAACGACGCCGCCGGGTACGAGGGTTCTGCTTCGTCTAGCGGGGGGAACATGACGCTGGCGAAGAGGAACAGGCTGAAGGAGCTTGTGAGGGTAAAAGATCTGAGTCTGAAGGACCAGCGGCATTACCGAGAAGTGGTGAGAAGGACGAGGTTGATCTATGACTCACTTCGGGTGCTGGCGACGGCGGAGGAGGAGAGGAGGATGATGCTGACTGATTGGAGGAAGGCCAGAGGGGACCTTAGGGCATCGACTTTGATGAAAACTTGCGGCCTTTGGCTTAACCGCGACAAGAGGATCGTCGGCGCCATCCCTGGGGTTTTTGTTGGGGATGTGTTCTTATACAGGATGGAATTATGTGTTGTCGGCCTTCACGGGCAGACGCAGGCCGGAATTGATTATCTTCCGGCGAGTATGAGCTCCAATGGTGAGCCAATTGCCACCAGTGTCATTGTTTCTGGTGGCTATGAGGATGATATGGATGATGGTGATGTTATCATTTACTCTGGTCATGGGGGACAGGACAAGCATTCTAGGCAGGTGTTTCATCAGAAGTTGGAAGGAGGGAATTTGGCATTGGAGAGGAGTATGCATTATGGGATTGAGGTGAGGGTTATTCGGGGATTGCGGTACGACGGAACTGCCACTGCTGCCAGTAAGGTTTATGTTTATGATGGTTTGTATAGGATTATGGATTGCTGGTTTGATGTTGGGAAGTCTGGTTTCGGTGTTTATAAGTATAAGCTGTTTAGGGTTGATGGGCAGGCTAAGATGGGTAGTGCTGTTCTTAAGGAGGCTTGTATGCTTAGGAAGGATCCATTGTGTTTTAAGCCTGTGTGTTGTTTGTCTCTTGATATTTCGCATAGGAGGGAGAATGTTGCGATTCGGCTTTTTAACGACATTGATAAGAGTAATGAACCGCTTTGTTATGAGTATCTTCCGAAGACTAATTTTCCGCCTATTGTGTTTCATCAGACTGGGAACGCTATGGGTTGTGAGTGTGTGGATGGTTGTGTTGAAGGCTGCTTTTGCGCTATGAAAAATGGAGGTGAGTTTCCTTATAATCAGAGTGGGATTTTGTTGAGAGGGAAGCCTATAATATTTGAATGTGGCCCCTTTTGCCGATGTCCTCCGCATTGTCGGAACCGTGTCGCACAGAAGGGGTTGAAAAGTAGGTTGGAAGTGTTTAGGTCTAGGGAAACTGGCTGGGGAGTTAGATCCTTGGACCTTATACAAGCTGGTGCTTTTATATGCGAATATACGGGTGTTATCCTGACCAGGCAGCAAGCACAAATTTTGACCATGAATGGTGATGCATTGATATATCCTAATCGGTTTACTGATAGGTGGGCAGAATGGGGGGATATATCTCTAATAAATTCCAATTATGTTCGCCCATCATTTCCGTCGATACCTCCTTTAGATTTTGCTTTGGATGTGTCAAGATTGAGGAATGTAGCCTGCTACATGAGTCATAGTACATCTCCGAATGTGTTGGTTCAGTTTGTTCTGTATGATCACAATAATTTAATGTTCCCTCACCTTATGCTATTTGCAATGGAGAGCATCCCGCCGATGAGAGAGCTCAGCCTTGATTACGGGGTGACTGATGACTGGACAGGCAAGCTCGCTATATGTAACTGA 2160 0.4852 MESVTSAQNTNQPKETPFPLFPPGIPIPTTTIEKAVTATTTATATNVPTPFLIIPKHEPVEECTTPIPTSNNQDVKPIFPNAPRRETLPAPVTAPATAPHSATSCDPSDNANGLYEEFNRVSQLFRTAFAEQQQHQLRASQQMDSSNDLVLDPNSGAIVPVPPPQEYGGHWNGNDAAGYEGSASSSGGNMTLAKRNRLKELVRVKDLSLKDQRHYREVVRRTRLIYDSLRVLATAEEERRMMLTDWRKARGDLRASTLMKTCGLWLNRDKRIVGAIPGVFVGDVFLYRMELCVVGLHGQTQAGIDYLPASMSSNGEPIATSVIVSGGYEDDMDDGDVIIYSGHGGQDKHSRQVFHQKLEGGNLALERSMHYGIEVRVIRGLRYDGTATAASKVYVYDGLYRIMDCWFDVGKSGFGVYKYKLFRVDGQAKMGSAVLKEACMLRKDPLCFKPVCCLSLDISHRRENVAIRLFNDIDKSNEPLCYEYLPKTNFPPIVFHQTGNAMGCECVDGCVEGCFCAMKNGGEFPYNQSGILLRGKPIIFECGPFCRCPPHCRNRVAQKGLKSRLEVFRSRETGWGVRSLDLIQAGAFICEYTGVILTRQQAQILTMNGDALIYPNRFTDRWAEWGDISLINSNYVRPSFPSIPPLDFALDVSRLRNVACYMSHSTSPNVLVQFVLYDHNNLMFPHLMLFAMESIPPMRELSLDYGVTDDWTGKLAICN 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g03002 719 Pfam Pre-SET motif 458 555 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu10g03002 719 SUPERFAMILY SET domain 448 708 IPR046341 -
Adu10g03002 719 SMART preset_2 455 547 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu10g03002 719 MobiDBLite consensus disorder prediction 1 15 - -
Adu10g03002 719 SMART G9a_1 269 427 IPR003105 -
Adu10g03002 719 MobiDBLite consensus disorder prediction 92 111 - -
Adu10g03002 719 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 55 716 - -
Adu10g03002 719 MobiDBLite consensus disorder prediction 1 23 - -
Adu10g03002 719 Pfam SET domain 574 706 IPR001214 GO:0005515
Adu10g03002 719 Pfam SAD/SRA domain 273 427 IPR003105 -
Adu10g03002 719 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 133 719 IPR025794 GO:0016571
Adu10g03002 719 ProSiteProfiles SET domain profile. 563 706 IPR001214 GO:0005515
Adu10g03002 719 SMART set_7 563 712 IPR001214 GO:0005515
Adu10g03002 719 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 55 716 - -
Adu10g03002 719 ProSiteProfiles YDG domain profile. 274 423 IPR003105 -
Adu10g03002 719 Gene3D - 271 431 IPR036987 -
Adu10g03002 719 SUPERFAMILY PUA domain-like 255 435 IPR015947 -
Adu10g03002 719 ProSiteProfiles Pre-SET domain profile. 502 560 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Adu10g03002 719 Gene3D SET domain 432 719 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g03002 Adu-Chr10 106069102 106073864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g03002 216 708 Su(var)3-9 homologs AT5G04940 38.200 1.45e-102 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Adu10g03002 SAD_SRA 6.1e-48 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g03002 K11420 - gmx:100804592 957.207