Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02994 ATGCAAGCAGAAAGTATTATCAAGGAAGGGAGCAAAGAAGAGAGGGATGAGAGATGGAGCAGCATGGGGCACATGATCTGGGCTATATGGAAGACGAGAAATGCAGCAATATTTCACAATCTAAAAGCAGAGCCTCTAAGCACTATAATCCAAGCTAGAGTACAAGAAAGCCAAGGATACCACAGAGCAAATAGAATCAAAGGCAAGCTGCAACAGCGTCCATTATTAGATAGCGAGGGTCCTCCTTCCATTAGCGCCGGAGCAACGCAGCGAGCATGGTCGCAGTCAACAGCGGAGCTGCAGCAGCGTCCGCCTATTCTAACAAACTTTGATGTTTGCTTTGGGGAGTTAGATTCTGGTGTTCAGCAGCTTAGGTTCATTTGCACTGCAGAAGATATACCACACAAGTTCACTAGCAAATATGGTGGTGGTGTGAAAAATCCAGTGTACCTGAAGCCTCCAGATGGCACTCAATGGAAAGTACATTGGACTCAGCATGATGATCAGATTTTAGTTGAAAAGGGTTGGAAAGAGTTTGCTGCTTATTATTCTCTGGATCATGGCCACTTGATGCGGTTTGAGTACAATGGAACTTCTTGTTTTGAGGTACACATACTTGACATGAGTGGCCTTGAAATACACCATCATTTCAATAACCGGATCGACAATGATTTGGTTGAGACTTAG 687 0.444 MQAESIIKEGSKEERDERWSSMGHMIWAIWKTRNAAIFHNLKAEPLSTIIQARVQESQGYHRANRIKGKLQQRPLLDSEGPPSISAGATQRAWSQSTAELQQRPPILTNFDVCFGELDSGVQQLRFICTAEDIPHKFTSKYGGGVKNPVYLKPPDGTQWKVHWTQHDDQILVEKGWKEFAAYYSLDHGHLMRFEYNGTSCFEVHILDMSGLEIHHHFNNRIDNDLVET 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02994 228 CDD B3_DNA 133 207 IPR003340 GO:0003677
Adu10g02994 228 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 131 216 - -
Adu10g02994 228 Gene3D - 121 210 IPR015300 -
Adu10g02994 228 PANTHER B3 DOMAIN-CONTAINING 131 216 - -
Adu10g02994 228 MobiDBLite consensus disorder prediction 83 99 - -
Adu10g02994 228 Pfam B3 DNA binding domain 133 206 IPR003340 GO:0003677
Adu10g02994 228 MobiDBLite consensus disorder prediction 70 99 - -
Adu10g02994 228 ProSiteProfiles B3 DNA-binding domain profile. 133 209 IPR003340 GO:0003677
Adu10g02994 228 SMART B3_2 120 209 IPR003340 GO:0003677
Adu10g02994 228 SUPERFAMILY DNA-binding pseudobarrel domain 133 209 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02994 Adu-Chr10 106027437 106031115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02994 133 223 B3 DNA Binding Superfamily AT3G18990 37.363 1.46e-15 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02994 B3 1.8e-10 CL0405