Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02986 ATGGTTGCTAACACTAGGTTCATAACATTGCAGAAGTTACCAATAAAGTTCACTGAAAAATATGGTTCTAGCTTATCAAACCCATTGTATCTTAAGCCTCTGGATGGTACTGAATGGAGAGTAGAGTGGACTAATCATGATGGTGGAATTTTGTTTAAAAAGGGTTGGAAAGCGTTTGTTGCATATTACTCTCTTGATCATGGCCATTTGTTATGGTTTGAGTATAATATTGGAACTTCTCACATGGAAGTATACATATTTGACACGAGTTGCCTCCAAATAGAGTATGCTGCCAATGATCAGATCAAAGAGCAGCTGCTACGCAGGAGTCAGCAGCCCGGCGAAAAGGCCAGAAGAACAAAAATTTAG 369 0.393 MVANTRFITLQKLPIKFTEKYGSSLSNPLYLKPLDGTEWRVEWTNHDGGILFKKGWKAFVAYYSLDHGHLLWFEYNIGTSHMEVYIFDTSCLQIEYAANDQIKEQLLRRSQQPGEKARRTKI 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02986 122 SMART B3_2 7 90 IPR003340 GO:0003677
Adu10g02986 122 SUPERFAMILY DNA-binding pseudobarrel domain 12 96 IPR015300 -
Adu10g02986 122 PANTHER B3 DOMAIN-CONTAINING 12 105 - -
Adu10g02986 122 CDD B3_DNA 13 88 IPR003340 GO:0003677
Adu10g02986 122 Gene3D - 3 91 IPR015300 -
Adu10g02986 122 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 12 105 - -
Adu10g02986 122 ProSiteProfiles B3 DNA-binding domain profile. 1 90 IPR003340 GO:0003677
Adu10g02986 122 Pfam B3 DNA binding domain 12 89 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02986 Adu-Chr10 105925055 105925423 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02986 12 96 B3 DNA Binding Superfamily AT3G18990 41.176 1.53e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02986 B3 2.8e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02986 - - ahf:112771694 177.178