Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02985 ATGGCTTCCTCTAGTTTCCAAAGAAACAAGCATTCTCCTTCCTCTGTGACCTGTTTCTACAAGATTGTTCTCAAACAAAGCCTTGAAGATGGAAACGTTACGGTACCAAAAACGTTCAGTGGTGTTCCAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTGCATGGAAGATATACTGGTCTGAGTATGATGGTGGCATTCTATTTGAAAATGATTGGAAAGAATTTGCCTCATATTACTCTTTGGATCGTGGCCATTTGCTGTGGTTTGGGTGCAATAAAACTTCTAACATTGAAGTACACATTTTTGACATGACTTTCCTTGAAATAGACTATCCTTCCTTGGATCACATCAGCGATGACGATTCGATTGAGATCTTGAATGAACTGCCGCCACGAGGCTGGCCGAGGAAAACAGAGAAAGCAGCACCAAAGACACCATCTGCTTCTACAAGTAAAATGTTCACAAGTTCTGCCAAAACTGAAGGAGTGAAATGGTGCCCCGAAATAGACTATCCTTCCAAGGACCGCATTGATGATGACAACATGGTTAAGGTTCAGAATGGACCGCCACGAAGAGGGCGAGCCCGTCCGAGAAAAACAGAGAAAGCAACACCAAAGACACCATCTGCTTGTACAAGTAAAATGTTCACAAGTTCTGTCAAAACTAGGTGCCCTGAAATAGACTATCCTTCCAAGGACCACATTGATGATGACAACATGGTTAAGGTTGAGAATGAACCGCCACGAAGAGGCCGAGGCCGGCCGAGGAAAAAATTGAAAGCAGCAGCAGAAGTATCATCTCCTTCTACAAGTAAAATATTGAGTAGTTCTGTCAAAACTGGAGATGTAGAGAAGGCCCCTGATAAACAAAACTGGATGCAGTGTTGCAAGAATGAAGAAGCTAGTCAATCTGAATGA 921 0.4321 MASSSFQRNKHSPSSVTCFYKIVLKQSLEDGNVTVPKTFSGVPNPVYLKPPDGTAWKIYWSEYDGGILFENDWKEFASYYSLDRGHLLWFGCNKTSNIEVHIFDMTFLEIDYPSLDHISDDDSIEILNELPPRGWPRKTEKAAPKTPSASTSKMFTSSAKTEGVKWCPEIDYPSKDRIDDDNMVKVQNGPPRRGRARPRKTEKATPKTPSACTSKMFTSSVKTRCPEIDYPSKDHIDDDNMVKVENEPPRRGRGRPRKKLKAAAEVSSPSTSKILSSSVKTGDVEKAPDKQNWMQCCKNEEASQSE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02985 306 PANTHER B3 DOMAIN-CONTAINING 15 189 - -
Adu10g02985 306 SUPERFAMILY DNA-binding pseudobarrel domain 12 105 IPR015300 -
Adu10g02985 306 MobiDBLite consensus disorder prediction 177 292 - -
Adu10g02985 306 PRINTS High mobility group protein (HMGY) signature 190 202 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Adu10g02985 306 PRINTS High mobility group protein (HMGY) signature 239 258 IPR000116 GO:0000785|GO:0003677|GO:0005634|GO:0006355
Adu10g02985 306 MobiDBLite consensus disorder prediction 206 221 - -
Adu10g02985 306 MobiDBLite consensus disorder prediction 227 252 - -
Adu10g02985 306 MobiDBLite consensus disorder prediction 129 155 - -
Adu10g02985 306 PRINTS AT-hook-like domain signature 248 258 IPR017956 GO:0003677
Adu10g02985 306 PRINTS AT-hook-like domain signature 130 140 IPR017956 GO:0003677
Adu10g02985 306 PRINTS AT-hook-like domain signature 190 201 IPR017956 GO:0003677
Adu10g02985 306 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 15 189 - -
Adu10g02985 306 MobiDBLite consensus disorder prediction 265 279 - -
Adu10g02985 306 Gene3D - 12 107 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02985 Adu-Chr10 105921405 105922469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02985 3 126 B3 DNA Binding Superfamily AT4G01580 35.821 6.88e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02985 - - ahf:112717083 404.831