Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02984 ATGATCCGTTTCTTTAAGATTGTTCTCAGAAAAAGTCTTGATGATGGATATCTTAAAATGCCAAACAAGTTCCGTAGGAAATATGGTGGTGATATGCCAAATCCAGTGAAACTCCAGCCTCCAGATGGCACTGAATGGAGAATAGATTGGACTAATCGTGACGGTGAGATTTTGTTTGAAAAGGGTTGGAAAGAGTTTGCTACATTTTACACTTTGGAGAATGGTCATGTGTTGTGGTTTGAGTACAACGGAACTTCTAACATCAAAGTAAACATATTCGACATGACTGCCCTCGAAATTGATTATCCTTCCAATGGTCGAATCGGTGATGACAACTCGGTTGAGATTTTGGATGAACCGCCGCCACGAAGGGACCGAGGCCGGCCGAAGAAAAAAGTGATAGCAGAACCAAAGCAATCACGTGCTTCTACAAGCAAAAAAATGAAAAGTGCCATCAAAACTAAAGATAAAGATAAAAATCCCAATACACAAAACTTGAAGCTGCATGTCGAGAATGAAAAAGATGGTCAATCTGAAGAGACAGCAGATCTTAAGCTGCCAATAATTCAACGTGCCAGACCAGATATGGATGTTATTAGAGAAGCAAAGAAGTTCAAGTCGAAAAATCCTTCTTTTGTCATCAAGATTAAGCAAAAGCACCAAACAGGATCACCAGCAAATCTTCCAGTTTGTTTCTTCAGAATGTACTTCGAGAACACGAAGCAGTATGCAATTCTACGAGTTGGAAAGAAGCAGTGGCATGCAACATTGATCTATTATCCAAATAGGAAGAATGCCCTTATCTCTAATTGGCGCTTGTTCGTTAAAGAAAATAACTTAAAAGCCGGAGATGTTTGCATCTTTGAGCTCATTAACAGACAAGATCCAGAACTTAAGGTTCATATTCGTCGAAGCCATGATTAG 924 0.395 MIRFFKIVLRKSLDDGYLKMPNKFRRKYGGDMPNPVKLQPPDGTEWRIDWTNRDGEILFEKGWKEFATFYTLENGHVLWFEYNGTSNIKVNIFDMTALEIDYPSNGRIGDDNSVEILDEPPPRRDRGRPKKKVIAEPKQSRASTSKKMKSAIKTKDKDKNPNTQNLKLHVENEKDGQSEETADLKLPIIQRARPDMDVIREAKKFKSKNPSFVIKIKQKHQTGSPANLPVCFFRMYFENTKQYAILRVGKKQWHATLIYYPNRKNALISNWRLFVKENNLKAGDVCIFELINRQDPELKVHIRRSHD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02984 307 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 305 - -
Adu10g02984 307 SUPERFAMILY DNA-binding pseudobarrel domain 205 305 IPR015300 -
Adu10g02984 307 MobiDBLite consensus disorder prediction 109 180 - -
Adu10g02984 307 Pfam B3 DNA binding domain 228 305 IPR003340 GO:0003677
Adu10g02984 307 Pfam B3 DNA binding domain 5 94 IPR003340 GO:0003677
Adu10g02984 307 ProSiteProfiles B3 DNA-binding domain profile. 3 96 IPR003340 GO:0003677
Adu10g02984 307 PANTHER B3 DOMAIN-CONTAINING 2 305 - -
Adu10g02984 307 CDD B3_DNA 228 304 IPR003340 GO:0003677
Adu10g02984 307 SMART B3_2 212 306 IPR003340 GO:0003677
Adu10g02984 307 SMART B3_2 4 96 IPR003340 GO:0003677
Adu10g02984 307 Gene3D - 2 97 IPR015300 -
Adu10g02984 307 Gene3D - 193 307 IPR015300 -
Adu10g02984 307 CDD B3_DNA 3 94 IPR003340 GO:0003677
Adu10g02984 307 MobiDBLite consensus disorder prediction 112 137 - -
Adu10g02984 307 ProSiteProfiles B3 DNA-binding domain profile. 251 306 IPR003340 GO:0003677
Adu10g02984 307 MobiDBLite consensus disorder prediction 149 180 - -
Adu10g02984 307 SUPERFAMILY DNA-binding pseudobarrel domain 3 103 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02984 Adu-Chr10 105914383 105920615 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02984 4 307 B3 DNA Binding Superfamily AT3G18990 26.488 1.01e-30 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02984 B3 1.7e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02984 - - aip:107621185 588.186