Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02981 ATGACATCCAAACCAGTCCGTTTCTTCAAGGTTATAATCTCACAATCTCTTCAACAAGGGATACTTAAACTCCCAAAGAATTTCAGTAGAAAATATGGTGCTTCTTTACCAAAGCCTGTGTTTCTCAAGCCTCCAAATGGAACTGAATGGAAAGTAGATTGGACTATGCATGATGCTGCTGTTGTGTTTGAAAATGGTTGGAAAGAGTTTGTTACATATTACTCTATAGATCATGGGCATGTGTTGAAGTTTGAATATAATGGAAATTCCAAATTGGGGGTTCAAATTTGTGACAAGAGTGGCCTTGAAATAAAGTATCCTTTCAATGTTAATCAACAAGAAAAGGTTAACATTATTGAGATCAGTGATGAAGAAGTTCAAGCGTTCGATGAAATGCCTCAACGACAAAACAATAGAAGGAAATCACCAAAGTCTCAGCTTAACCAAAGGAATGGTAATCAGTCTCAAGGGACAAGTTTTTTGAAGTCAACATCAACATCCATTGAAAAAGAATTAGATGGTGATGAAGAAGATAAAAGTAAGGATAGCATTTCCATTAAAGATAGAAAGGAAACTCAAACAACTTCAAAGGTTACAAGTCCCCTCGCTGAAACAAGTGGTACTCTGAAGGAAGCTGAGAAATTCACCTCAAAAAATCCGTTTTTCATCATAAATGTAACGAAAAAATTTCTGGACCAAAGCAGACCGAATGTACCAATTGACTTTGTCAAAAAGTACCTCAAGCAAAAGCAGTATGCCATGGTAAGGTTTAGAAATAAATTGTGGCCTTTGAAGTTGCTGCCTTATGTAACAAAAAAGGAATCAATCCGGTTGTCCACTGGTTGGAACTTGTTTGCTAAAGCAAGTGAATTGCAAGCTGGAGATGTTTGCATCTTTGAGCTGATCAACATGACAAATTCAGAGTTTGATGTTCACTTCTTTAGATCTCACTCCTAA 957 0.3657 MTSKPVRFFKVIISQSLQQGILKLPKNFSRKYGASLPKPVFLKPPNGTEWKVDWTMHDAAVVFENGWKEFVTYYSIDHGHVLKFEYNGNSKLGVQICDKSGLEIKYPFNVNQQEKVNIIEISDEEVQAFDEMPQRQNNRRKSPKSQLNQRNGNQSQGTSFLKSTSTSIEKELDGDEEDKSKDSISIKDRKETQTTSKVTSPLAETSGTLKEAEKFTSKNPFFIINVTKKFLDQSRPNVPIDFVKKYLKQKQYAMVRFRNKLWPLKLLPYVTKKESIRLSTGWNLFAKASELQAGDVCIFELINMTNSEFDVHFFRSHS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02981 318 SUPERFAMILY DNA-binding pseudobarrel domain 3 101 IPR015300 -
Adu10g02981 318 SMART B3_2 8 100 IPR003340 GO:0003677
Adu10g02981 318 SMART B3_2 221 317 IPR003340 GO:0003677
Adu10g02981 318 MobiDBLite consensus disorder prediction 168 194 - -
Adu10g02981 318 Gene3D - 2 101 IPR015300 -
Adu10g02981 318 MobiDBLite consensus disorder prediction 139 167 - -
Adu10g02981 318 SUPERFAMILY DNA-binding pseudobarrel domain 215 316 IPR015300 -
Adu10g02981 318 Gene3D - 202 317 IPR015300 -
Adu10g02981 318 ProSiteProfiles B3 DNA-binding domain profile. 7 100 IPR003340 GO:0003677
Adu10g02981 318 PANTHER B3 DOMAIN-CONTAINING 2 316 - -
Adu10g02981 318 Pfam B3 DNA binding domain 221 316 IPR003340 GO:0003677
Adu10g02981 318 Pfam B3 DNA binding domain 8 99 IPR003340 GO:0003677
Adu10g02981 318 ProSiteProfiles B3 DNA-binding domain profile. 221 317 IPR003340 GO:0003677
Adu10g02981 318 CDD B3_DNA 7 98 IPR003340 GO:0003677
Adu10g02981 318 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 316 - -
Adu10g02981 318 MobiDBLite consensus disorder prediction 130 203 - -
Adu10g02981 318 CDD B3_DNA 220 315 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02981 Adu-Chr10 105884120 105885899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02981 8 315 B3 DNA Binding Superfamily AT3G18990 26.744 9.76e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02981 B3 6.6e-11 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02981 - - adu:107471968 616.69