Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02977 ATGCCTTTACATGAAAGAGGTTTCTTTAAAGTTCTTGTTCAAAGCTTTAAGCATGAGTTGAAAATTCCTAAAGTTTTTGTGAAAGAATATTGGAGAGGAGTATCAAATCCTATAGTGTTAAAGCTACCAAACACTCTTAAACAAAGAGTATATTGGATTCAAAAGAATGAAGGTGAAATTTGGTTGGAAGAAGGTTGGGATCAAGTTGTGAAGGATTTTGGCTTAGAATATTCTCAGTTTTTGACTTTTGATTATAAAGGATGGTCTTGCTTTGAAGTCAAAATATATCCTATGAAGGATTCTGAGATAATGCCTCCTCATCATCAAATATGTTTCTTTCAGATTCTTGCTCACAACAAGTTTTACCAAAAGCTGATGATTCCTAAATGTGCAAATGAATATTGGAAAAGAATGTCAAACCCTATAAAATTGGTATTACCTTGTGGTAGTGTTGAGAGGAAAGTGATGTGGACCAAAAGAGGAGAAAATATTTGGTTGGAACAAGGTTGGGAAAAGGTTGTGGAGTTGTGTGGTTTGAGTTATGAGTGGTTGTTGACTTTTGACTACAATGGAAGGTCTAGTTTTGAAGTCAAAGTATATGATACCACTGGTTTAAGGGTAGCTTATTATAATTTTGATGAGTATGATGTTGAGAataataaagatgttgatgaaactgagagcgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgaggatgatgATGATTTTGCTGATGATTATTGTGATGAAGAATATCATCATTATGAGTTTGTTCAAGAACACTTCAAGAGAAAGAAGATCAACACAGTTAATGGGAGCAATAGGAATCCCAGTTTCAAGATTCGAATTCAAGAATCATATGTTGAGTCAAGATGCGTGGCAATACCAGCAACGTTTGCAAGGAAGCATTTGGAGGAAGGACCGATTCGTATGATTGTGGGTAACAGAGCTTGGACTGTGTGCTACAAAACTTGGAGAGGAAGGGCCAGATATCGCAAACACAAATTGCAAAGTGGGTGGCTCAGATTTAGAAGAGAGAACAATTTAGAGGTTGGTGATGTTTGTGTCTTTGAGTTAATTAGCAAATTTCCTCAGACAATGATCGTCAGAGTGCAGAGTGGATGA 1158 0.3307 MPLHERGFFKVLVQSFKHELKIPKVFVKEYWRGVSNPIVLKLPNTLKQRVYWIQKNEGEIWLEEGWDQVVKDFGLEYSQFLTFDYKGWSCFEVKIYPMKDSEIMPPHHQICFFQILAHNKFYQKLMIPKCANEYWKRMSNPIKLVLPCGSVERKVMWTKRGENIWLEQGWEKVVELCGLSYEWLLTFDYNGRSSFEVKVYDTTGLRVAYYNFDEYDVENNKDVDETESDDDDDDDDDDDDDDDDDDDDEDDDDFADDYCDEEYHHYEFVQEHFKRKKINTVNGSNRNPSFKIRIQESYVESRCVAIPATFARKHLEEGPIRMIVGNRAWTVCYKTWRGRARYRKHKLQSGWLRFRRENNLEVGDVCVFELISKFPQTMIVRVQSG 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02977 385 Pfam B3 DNA binding domain 8 95 IPR003340 GO:0003677
Adu10g02977 385 Pfam B3 DNA binding domain 290 382 IPR003340 GO:0003677
Adu10g02977 385 SUPERFAMILY DNA-binding pseudobarrel domain 8 105 IPR015300 -
Adu10g02977 385 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 106 - -
Adu10g02977 385 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 109 375 - -
Adu10g02977 385 SMART B3_2 290 383 IPR003340 GO:0003677
Adu10g02977 385 SMART B3_2 8 99 IPR003340 GO:0003677
Adu10g02977 385 SMART B3_2 112 203 IPR003340 GO:0003677
Adu10g02977 385 Gene3D - 104 204 IPR015300 -
Adu10g02977 385 Gene3D - 3 99 IPR015300 -
Adu10g02977 385 CDD B3_DNA 288 382 IPR003340 GO:0003677
Adu10g02977 385 PANTHER B3 DOMAIN-CONTAINING 109 375 - -
Adu10g02977 385 PANTHER B3 DOMAIN-CONTAINING 7 106 - -
Adu10g02977 385 MobiDBLite consensus disorder prediction 220 254 - -
Adu10g02977 385 Gene3D - 267 384 IPR015300 -
Adu10g02977 385 ProSiteProfiles B3 DNA-binding domain profile. 289 385 IPR003340 GO:0003677
Adu10g02977 385 SUPERFAMILY DNA-binding pseudobarrel domain 285 383 IPR015300 -
Adu10g02977 385 CDD B3_DNA 8 97 IPR003340 GO:0003677
Adu10g02977 385 SUPERFAMILY ARM repeat 211 273 IPR016024 -
Adu10g02977 385 SUPERFAMILY DNA-binding pseudobarrel domain 108 202 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02977 Adu-Chr10 105860171 105862134 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02977 105 371 B3 DNA Binding Superfamily AT3G18990 23.353 5.41e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02977 B3 5e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02977 - - ahf:112718388 751.125