Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02976 ATGGCTTTTAATCAACAAGGAGAACCCACTAATAGTGTTGTTAGTTTCTTCAAGATCATTTGTCGTTGGCATATTCGAGATGAGAAGATTCTTCCAACGGAATTCACAAACAAATGTGGATTGAAACTCCCAAATCCGGTGATTCTGAAAGTTGTAAATGGCAACCAAAAGAAAGTGCATTGGACCAATATTAATGGTTCCATTTGGTTTATTGGGAAGGAATGGAAAGAGTTTCTTGAGCACTACTCTGTCTCCCATGGCCACCTTTTGTTGTTCAAATATTGTCCTGATGCTTCATATTTTAGGGTTCAAATATTTGATAACACTACTCTTGAAATTGATTACCCTTCCCCTGAACTCAATTATGCTGATTATGATGATGATGATTTTGATTTTGATGATGATGGTGATGGTGATGGTGATGATGATGTTATGAAGGTTCACTATGATCAATATCAATTCAAAGAGAAAAATAAGAGTATTGCTGATGCTATAAAGAGTAGAGACAGACAAGAGAGACAAGATGGTAACCCCAATTTTGAGGTTGTCATGAGGGATTCATATATTAATGGAGGAAGATGCATGGCCATACCATCTAATTTTGCAAGGAAGTACATGAAGGAAGGAGGGTACCTACTAAGAGTGGAGGATGGGAGGGCATGGAAAGTGATGTTTAAGACTTGGAGTGGAGATGGAGTCCCTTACAAGAAGTACAAATTGCAAAAGGGTTGGGCCAAATTTAGCCAAGGAAACAAGTTACAAAAGGATGATGTTTGTGTCTTTGAGCTTCTTTACAACAACAATTCTAATGGTAGCTCCACTACCATACCAACCTTCAATGTTCTAATTCACCGGAACCACATTGGTAGCAGCTATTCACCATGA 885 0.3819 MAFNQQGEPTNSVVSFFKIICRWHIRDEKILPTEFTNKCGLKLPNPVILKVVNGNQKKVHWTNINGSIWFIGKEWKEFLEHYSVSHGHLLLFKYCPDASYFRVQIFDNTTLEIDYPSPELNYADYDDDDFDFDDDGDGDGDDDVMKVHYDQYQFKEKNKSIADAIKSRDRQERQDGNPNFEVVMRDSYINGGRCMAIPSNFARKYMKEGGYLLRVEDGRAWKVMFKTWSGDGVPYKKYKLQKGWAKFSQGNKLQKDDVCVFELLYNNNSNGSSTTIPTFNVLIHRNHIGSSYSP 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02976 294 CDD B3_DNA 15 107 IPR003340 GO:0003677
Adu10g02976 294 Pfam B3 DNA binding domain 180 267 IPR003340 GO:0003677
Adu10g02976 294 SUPERFAMILY DNA-binding pseudobarrel domain 11 108 IPR015300 -
Adu10g02976 294 Gene3D - 154 290 IPR015300 -
Adu10g02976 294 Gene3D - 10 110 IPR015300 -
Adu10g02976 294 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 152 285 - -
Adu10g02976 294 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 160 - -
Adu10g02976 294 SMART B3_2 180 272 IPR003340 GO:0003677
Adu10g02976 294 SMART B3_2 16 109 IPR003340 GO:0003677
Adu10g02976 294 CDD B3_DNA 178 285 IPR003340 GO:0003677
Adu10g02976 294 ProSiteProfiles B3 DNA-binding domain profile. 180 287 IPR003340 GO:0003677
Adu10g02976 294 SUPERFAMILY DNA-binding pseudobarrel domain 174 266 IPR015300 -
Adu10g02976 294 PANTHER B3 DOMAIN-CONTAINING 152 285 - -
Adu10g02976 294 PANTHER B3 DOMAIN-CONTAINING 11 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02976 Adu-Chr10 105855726 105857857 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02976 4 128 B3 DNA Binding Superfamily AT4G01580 34.127 2.95e-16 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02976 B3 1.6e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02976 - - ahf:112784208 570.466