Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02921 ATGGAGAAAATGCCAGGGATTGCAGAAGCTGATGAGTCACCAACTTCTCCTTCCCTACCAGATTCACCTTGGCCACCGACTTCACCTTCACTACCAGATTCACCTTGGCCACCAGCTTCACCTTCAGAACTCAATGTAGTGGCTGATATGGAAACGGCGCAAGTACCTCCTACAGAGCTTTCTATTATCCATAAGAAGGGGTTTGGGACCACAGGAAAGAGGATACAATTGCTTGCCAATCACTTCAAAGTTGATGTTACTGATCCAGATGCAATATTTTTCCAATATAGTGTTGCTATTACTACAGAAGATAAAAGAACTGTCGAAGGCAAGGGTATTGGGAGAAAATTGATTGATAGGCTTTGCCAAAATTACTCGTCTGAACTTGGTGATAAAAGGTTTGCCTATGATGGAGAGAGAACTTTGTATACAGTCGGTCCTTTGCCATTTGATAAGTTTGAGTTCAAAGTATTGCTTGAGGAATCATTTGCGAAGCACCCTGGTGCTGATAATCCTGGTGCCAATGGAAGCCCTCATGAAGAAACCAAAAGGTCAAAGCATTCTTTTCAGTCCAAGGCATTCATAGTGGAGATAAGTTTTGCTGTCAAAATACCCCTGCGGTTCATTGCTCTTCCCCTAGAAGAGGTTGAGTCAGATACTAACTATCAGGATGCTTTGAGAGTGCTTGATATTGCACTGAGGCAGCAAGCAGCTAACAGAGGGTGTCTCTTGGTAAGACAATCTTTTTTTCAAGATGATGCAAGGAACTTCAGTGAGATCGGAGGCAATTTGATGGCAGTTCGTGGTTTTCATTCTAGTTTTCGTCCAACGCTGGGTGGATTGTCTCTCAATATGGATGTGTCCACAACAGTGGTCTTAAAAGCTGGACCTGTAATTGAATTTCTTCTTTATAACCAGAATGTGAAGGAAACCCGTTACATTGACTGGGCAAAGGCAAAAAAGGTGCTTAAAAATTTAAGAGTGCATGCAAAACATCGTAACCAGGAATTTAAAGTTTCCGGCTTGAGTGAGAAACCTTGCATTCAACAACTTTTTAGCATGAAGTTGAGGAATGATGATGACAAAAATCAAGGGGAGACAGTCAATATTACTGTATATGAGTATTTTGCTAAACACCACAGCTTGAAGCTGACCTCTTCTGCTTATCTTCCATGCCTTGATGTTGGGAAGCCAAGCCGGCCTATTTATCTGCCTTTGGAGCTATGTTCTCTTGTTTCACTCCAGCGGTACACGAAGGCATTATCTCCAATTCAGAAAGCATCTTTAATTGAAAAATCACGCCAAAAACCTCAAGACAAGATTAAGACTCTGACAAATGCTGTAGGAAATAATTCCTATGATCATGACCCTGTACTTGCTGCATGTGGAATTTATGTTGACAAGAAATTGACTGAGGTTGAAGGTCGTGTTCTTGAGCCACCAAAGTTGAAGGTTGGAAAGAATGATGATTGCTTCCCCAATAATGGAAGGTGGAGTTTCAGTAAAAAGACACTTCTACAACCATCACACATTGATTACTGGGCTGTTGTCAACTTTTCTGCACGTTGTGATACCAGTTACTTATCGAGGGAGCTGATCAAATGTGGAATGAGCAAGGGCATTAATATCGAACGCCCATATACTTTAATAGAAGAAGAACCACTGATGAAAAAATCTAGTGCTGTTGCAAGGGTTGAAAAGATGTTTGAGCGGCTTACGTCAAAGCTGACAAGAGAACCAAAGTTAATTCTCTGTGTCTTGCCAGAGAAGAAACATTGTGAAATTTATGGGCCTTGGAAGAAGAAGTGTCTCAGTGATTTTGGTGTTGTCACACAGTGCATTTGTCCTCTCAAGATCACTGATCAATACCTTACAAATGTACTTCTTAAAATCAACTCTAAGCTTGGAGGAGTAAATTCTTTGCTGGCAATAGAGCACTCTGGGCATATACCCCTGATTAAAGATACCCCAACAATGATTTTGGGAATGGATGTCTCTCATGGTCCTCCTGGTCAGTCAAATCTTCCATCGATAGCAGCAGTTGCAGGATCACGATGTTGGCCACTGATTTCAAGGTATAGAGCATCTGCAAGAACACAGTCATCTAAGGAGGAGATGATTGATGCCTTGTGCAAACCTGTGGATGAAGAGAATGATAATGGTATTATCAGAGAATTGCTTCTAGATTTCTACGAATCAAGTGATAAATGTAAACCATCTCAAATTATTGTCTTCAGGGATGGAGTTAGTGAATCACAATTTAATCAGGTTTTGAATGTTGAGCTTAACCAGATAAAGAAGGCGTACGAACTTCTTGAGGCTGTCATTATTCCCAAGTTCACGGTAATTGTGGCGCAGAAGAATCATCATACGAAGTTGTTTCTAGCTAATGGTCCAGAAAATGTTCCTCCTGGGACTGTTGTTGACACAAAAATCACACATCCAAGGAATTATGATTTCTACATGTGTGCTCATCAAGGGATCCATGGAACTTCCAAGCCTGTGCATTATCATGTGCTGCTCGACGAGATCGGTTTCTCGGTAGATGGCTTACAAAATTTGATCCATTCGCTGTCTTATGTGAACCAAAGGAGTACAATTGCAACCTCAATTGTGGCACCTATATGCTATGCACACCATGCTGCAGCTCAGATGGGGCAAATGTTAAATTTTGATGATTTGTCAGAAAAATCTTCAGATGTTACTTCAGAGGGAAACATTCCCATTCCAGAGCTTCCAAGGTTGCATAGGAATGTCAAGAGTACCATGTTCTTCTGTTGA 2781 0.4121 MEKMPGIAEADESPTSPSLPDSPWPPTSPSLPDSPWPPASPSELNVVADMETAQVPPTELSIIHKKGFGTTGKRIQLLANHFKVDVTDPDAIFFQYSVAITTEDKRTVEGKGIGRKLIDRLCQNYSSELGDKRFAYDGERTLYTVGPLPFDKFEFKVLLEESFAKHPGADNPGANGSPHEETKRSKHSFQSKAFIVEISFAVKIPLRFIALPLEEVESDTNYQDALRVLDIALRQQAANRGCLLVRQSFFQDDARNFSEIGGNLMAVRGFHSSFRPTLGGLSLNMDVSTTVVLKAGPVIEFLLYNQNVKETRYIDWAKAKKVLKNLRVHAKHRNQEFKVSGLSEKPCIQQLFSMKLRNDDDKNQGETVNITVYEYFAKHHSLKLTSSAYLPCLDVGKPSRPIYLPLELCSLVSLQRYTKALSPIQKASLIEKSRQKPQDKIKTLTNAVGNNSYDHDPVLAACGIYVDKKLTEVEGRVLEPPKLKVGKNDDCFPNNGRWSFSKKTLLQPSHIDYWAVVNFSARCDTSYLSRELIKCGMSKGINIERPYTLIEEEPLMKKSSAVARVEKMFERLTSKLTREPKLILCVLPEKKHCEIYGPWKKKCLSDFGVVTQCICPLKITDQYLTNVLLKINSKLGGVNSLLAIEHSGHIPLIKDTPTMILGMDVSHGPPGQSNLPSIAAVAGSRCWPLISRYRASARTQSSKEEMIDALCKPVDEENDNGIIRELLLDFYESSDKCKPSQIIVFRDGVSESQFNQVLNVELNQIKKAYELLEAVIIPKFTVIVAQKNHHTKLFLANGPENVPPGTVVDTKITHPRNYDFYMCAHQGIHGTSKPVHYHVLLDEIGFSVDGLQNLIHSLSYVNQRSTIATSIVAPICYAHHAAAQMGQMLNFDDLSEKSSDVTSEGNIPIPELPRLHRNVKSTMFFC 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02921 926 SMART PAZ_2_a_3 293 435 IPR003100 GO:0005515
Adu10g02921 926 Pfam Argonaute linker 2 domain 443 484 IPR032472 -
Adu10g02921 926 Gene3D - 477 643 - -
Adu10g02921 926 SMART DUF1785_2 243 295 IPR014811 -
Adu10g02921 926 CDD Piwi_ago-like 457 884 IPR045246 -
Adu10g02921 926 SUPERFAMILY Ribonuclease H-like 567 890 IPR012337 -
Adu10g02921 926 MobiDBLite consensus disorder prediction 1 43 - -
Adu10g02921 926 SMART Piwi_a_2 582 890 IPR003165 GO:0003676
Adu10g02921 926 Gene3D paz domain 289 417 - -
Adu10g02921 926 PANTHER PROTEIN ARGONAUTE 6 55 925 - -
Adu10g02921 926 Coils Coil 755 775 - -
Adu10g02921 926 MobiDBLite consensus disorder prediction 18 39 - -
Adu10g02921 926 ProSiteProfiles PAZ domain profile. 320 413 IPR003100 GO:0005515
Adu10g02921 926 Pfam Piwi domain 582 889 IPR003165 GO:0003676
Adu10g02921 926 Pfam PAZ domain 299 428 IPR003100 GO:0005515
Adu10g02921 926 SUPERFAMILY PAZ domain 290 453 IPR036085 GO:0005515
Adu10g02921 926 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 55 925 - -
Adu10g02921 926 CDD PAZ_argonaute_like 295 412 - -
Adu10g02921 926 ProSiteProfiles Piwi domain profile. 582 890 IPR003165 GO:0003676
Adu10g02921 926 Gene3D - 649 926 IPR036397 GO:0003676
Adu10g02921 926 Pfam Argonaute linker 1 domain 245 292 IPR014811 -
Adu10g02921 926 Pfam N-terminal domain of argonaute 73 233 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02921 Adu-Chr10 105544535 105552917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02921 65 926 Eukaryotic Initiation Factors Gene Family AT1G48410 36.503 1.77e-165 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02921 K11593 - gmx:100778875 1365.9