Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02863 ATGTCCGCGGGCGATTCCTTCGCGAACCATAAGCTATGCGGTTTCCTCTGTGCCGTTCTCAGAGTCACTCCTCCAATTCGATCTGAAGGATATAGTTCCACTTCTTCGTTCAACGACCAATGCGAGATCTTCGGCGACGGTTTCCGGTCCCGGAATGGCGTCGTTTTGTGTCCGTTGGGGACTGGTTCGGATTCAGGACAATGCGAAGGAGGAGAGAGTATTAGCAGTGGTGGTAGCGGCGGATCCTCTTCGAAAGGGAGGAGGATGAGTAAGGTTGGGATGGTGAATGGGAGCATTAGCGTGGTTCACCAGCTTCACGCTCTGGTGAGCCGCAACTGCATCACGAGTGATGCTCGAGTGGTGTGGGTGGAGGTCGGAGAAGGGAAGGAGGTGAGGGCGGTGGTGCTCATCGATGTCTACCTCACAATTGAGCTCTGGAGTGGCTGGCAGTTCCCGCGGTCGGGGCCGGTTGCCGGCGCTTTCTTTAGCCACCTGAGCTGTGATTGGGACAAGAGAAGTTCAATACTTTCTGATCCAGACTATTTTATGAAGACTTTTGGGACAAGCGACAACATCTGGAACCTTTCTGACTGTCATGTACTTGGTTGCAAGCTCCATTATGGTGCAAGTGATTCTTCAAAGAAAAGACTATTTGAACTTCATGAAATATTTAAGATGGTACCTGGTGTTGGAAAACAGCAGAAATCTAACAATTCAAGGATAGCACCTATTGATAATGCTTTCGGATCTGGGATTTGGGAGATATCTGATGATATTTTAACCAAAATTTTAGCTTGCCTTGGTCCAATGGACCTCACTAGGGTATCTGCAACGTGTCGACATCTCAGATCCTTGGCTGCTTCAGTAATGCCTTGTACAAAGTTAAATCTCTTTCCTCATCAGCAGACTGCAGTTGAGTGGATGTTGCATCGTGAGCGAAATTTTGAACAATTGCTACATCCCTTATATATTGCTCTCTTAACTGAAGATGGCTTTAGTTTCCACGTGAATACTGTATCTGGGGAAATAATTTCTGAGGAAACTCCCACCATCAGAGATTTTCGCGGAGGGATGTTTTGTGATGAGCCTGGCTTGGGTAAGACTGTAACAACACTTTCTCTTATTGTGAAGACACAAGGTACTCTGGCAGATCCACCAGACGGGGCAGAAGTAATCTGGTGTCAACATAATGGTAACCAGAAATGTGGTTATTATGAGATCAGTGGTAATAATATAACTGGTTTTTGTGTGTTGGGTAAGAGGGATGTGGCCCAAGATACTAGTAAGAATAATGAGAACCATGACTACTCCTCAAAAAGAGCCAGATTGATGAATCCTGCTGGGAAAATTACTACACAAAATGACGTAATTTCTGCAGAAGCTATGAAATCGCCTGTAGATGCATCCTTTGAAGAATCGGTGCCTGCCAGTCGAAGCACTAGGAGTCTCAGTTGCGTCAAGAAAAAACTGAATCTCTCCTTTGAAGATGAAGACTTGATTTTCAAGGAAAGAAGAGTTGGTATGAGATCACATAAAAGAAATCACGAATCAGATATTGCATCATGTGTACCACCAAATAAACTAGTTAATGCTTCATATGGACGTGGGAAAAGTTCCAAGTTGCGTGGGAATCCTAAAGTTGATTGTTTGGAGTCCAAGGATACATGGATTCAGTGCGATGCATGTCACAAATGGCGAAAGGTTGCAGATAATATTATGGCTAATTCTAGTGCAGCATGGTTTTGTAGTATGAACACTGACCCTTCATATCAGAGTTGTAGTGTCCCAGAACAACATTTCCAGAATAGCTGTAAGATAACATACTTGCCAGGATTTCACTTGAAAGGAACTCTTGGGGGTTTGGAACAAAATATTTCCTTTTTCATTAGTGTTCTTAAGGAGCACTGTACATTGCTGAATTCTCAATCAAAGAAGGCTCTGACTTGGTTGGTTAAACTTTCAGCAGATCAGATTGCAGGAATGGAAACACATGGCATACGGGGGCCCATTTTGAACTCCTGTAGTACATCTAATGGATATTTTAATGCATTCCACAAAATATTTCAAGCATTTGGCCTTGTAAAGAGAGTAGAGAAAGGTATATGCAAGTGGTACTACCCACAAAATCTTAGCAATTTGACTTTTGATGTGAAAGCACTTGGCATGGCTCTACGTGAGCCATTAGATTTTGTGAGGCTGTACTTGTCAAGAGCAACCCTCATAGTTGTTCCAGCAAATCTGGTTGATCATTGGAAAACACAAATAGAGAAGCATGTAACTCCTGGTCAATTGCGGGTGTATGTTTGCGTTGATCAGCGGAAGCCATCTGCACACTGTTTAGCTTGGGATTATGATGTTGTTATAACTACCTTTAGCCGTTTAAGTGCAGAGTGGAACCCACGTAAGAGGAGTGTTTTGATGCAAGTACATTGGTTTAGGATAATTTTAGATGAAGGTCACACTCTTGGCTCAAGCCTGAACTTAACAAACAAGTTGCAAATGGCTATTTCAATGATGGCTTCAAATCGTTGGATACTAACAGGTACTCCAACACCTAACACCCCTAACAGCCAACTCCCACATCTACAACCTCTGCTAAGGTTCCTTCATGAAGAAGCTTATGGACTGAATCAGAAGTCGTGGGAAGCTGGCATCCTTAGGCCATTTGAGGCAGAGATGGAGGAAGGAAGGTCGCGCCTGTTGCATTTAATTCAGAAGTGCATGATTAGTGAAAGAAAGGTAGACTTGCAAAACATTCCGCCATGCATTAAGAAAGTTGTTTATGTGGATTTCAGTGAGGAACATGCTAGAAGTTACAATGAATTGGTACTCACTGTTCGGCGTAATATATTGATGGCTGATTGGAATGACCCTTCACATGTTGAGAGTCTACTGAATCCAAAACAATGGAAATTTCGAAGTGCAACCATAAAGAATGTGAGGCTCTCTTGCTGTGTTGCTGGGCATATTAAAGTTACACATGCTGGAGAAGATATTCAGGAAACAATGGATATTTTAGCACAAAGTGGTCTTGATGCTACTTCAGCAGAGTATAGCTCCATAAGATATAGTCTCCTATTTGGTGGTAATTGTGTCAGATGCAAGGAGTGGTGCCGCCTTCCTCTCATTACACCTTGTCGCCATCTATTGTGCCTTGATTGTGTTTCTTTAGACAATATGAAGTGTACATACCCTGGATGTGGTAAAGCATACGAAATGGAGAGTCCTGATTCATTGGCCCGACCAGAAAATCCTAACCCAAAGTGGCCTGTGCCCAAAGATCTTATTGAGTTGCAGCCTTCGTATAAGCAGGATGATTGGGATCCTGATTGGCAATCAACTTCTAGTAGTAAAGTCTCCTATCTTGTCCAGAGGTTAAAAGCTTTGCAAGAAAGCAATGAAGAGATGGGTTTCTGCAAAGCCAAGAGCAATCATGAGCTTGATACTGAGAATAGCTCCCCTATGCATATGAGAGATGGTGGATCATTATTCCAGGAATGTTCTATAAGAAGCACTATGACCAATATGAAACCTGACAAAGTTTTGATATTTTCCCAGTTTCTGGAGCATATACATGTCATTGAACAGCAGTTGACCATTGCTGGTATCAAATATGCTGGAATGTATAGCCCAATGCATTCAAGCAGCAAGAAGAAGTCATTAGCCACATTCCAGCATGATTCAAGTTGTATGGCACTTGTGATGGATGGAAGCGCTGCATTGGGGCTTGACCTGAGTTTCGTTACGCATGTATTTTTGATGGAGCCAATTTGGGACAGAAGTATGGAGGAGCAAGTAATTAGCCGTGCCCATCGCATGGGTGCTTCTCGTCCTATTCATGTGGAAACCTTGGCAATGCGTGGTACCATTGAAGAACAAATGGTGGAGTATTTACAGGATGCTGATAAATGTAGAAGATTTCCTAGTCAAGATACTCCCAAATCTGTAGATGATAGTGGGGGACGAGGACACCGTTCATTACATGATTTTGCTGAAAGTAGTTATCTACTCAAACTTAAATTTGTATATACTAATCCAGAAACCCTAAAAGGTGTATGA 4059 0.4282 MSAGDSFANHKLCGFLCAVLRVTPPIRSEGYSSTSSFNDQCEIFGDGFRSRNGVVLCPLGTGSDSGQCEGGESISSGGSGGSSSKGRRMSKVGMVNGSISVVHQLHALVSRNCITSDARVVWVEVGEGKEVRAVVLIDVYLTIELWSGWQFPRSGPVAGAFFSHLSCDWDKRSSILSDPDYFMKTFGTSDNIWNLSDCHVLGCKLHYGASDSSKKRLFELHEIFKMVPGVGKQQKSNNSRIAPIDNAFGSGIWEISDDILTKILACLGPMDLTRVSATCRHLRSLAASVMPCTKLNLFPHQQTAVEWMLHRERNFEQLLHPLYIALLTEDGFSFHVNTVSGEIISEETPTIRDFRGGMFCDEPGLGKTVTTLSLIVKTQGTLADPPDGAEVIWCQHNGNQKCGYYEISGNNITGFCVLGKRDVAQDTSKNNENHDYSSKRARLMNPAGKITTQNDVISAEAMKSPVDASFEESVPASRSTRSLSCVKKKLNLSFEDEDLIFKERRVGMRSHKRNHESDIASCVPPNKLVNASYGRGKSSKLRGNPKVDCLESKDTWIQCDACHKWRKVADNIMANSSAAWFCSMNTDPSYQSCSVPEQHFQNSCKITYLPGFHLKGTLGGLEQNISFFISVLKEHCTLLNSQSKKALTWLVKLSADQIAGMETHGIRGPILNSCSTSNGYFNAFHKIFQAFGLVKRVEKGICKWYYPQNLSNLTFDVKALGMALREPLDFVRLYLSRATLIVVPANLVDHWKTQIEKHVTPGQLRVYVCVDQRKPSAHCLAWDYDVVITTFSRLSAEWNPRKRSVLMQVHWFRIILDEGHTLGSSLNLTNKLQMAISMMASNRWILTGTPTPNTPNSQLPHLQPLLRFLHEEAYGLNQKSWEAGILRPFEAEMEEGRSRLLHLIQKCMISERKVDLQNIPPCIKKVVYVDFSEEHARSYNELVLTVRRNILMADWNDPSHVESLLNPKQWKFRSATIKNVRLSCCVAGHIKVTHAGEDIQETMDILAQSGLDATSAEYSSIRYSLLFGGNCVRCKEWCRLPLITPCRHLLCLDCVSLDNMKCTYPGCGKAYEMESPDSLARPENPNPKWPVPKDLIELQPSYKQDDWDPDWQSTSSSKVSYLVQRLKALQESNEEMGFCKAKSNHELDTENSSPMHMRDGGSLFQECSIRSTMTNMKPDKVLIFSQFLEHIHVIEQQLTIAGIKYAGMYSPMHSSSKKKSLATFQHDSSCMALVMDGSAALGLDLSFVTHVFLMEPIWDRSMEEQVISRAHRMGASRPIHVETLAMRGTIEEQMVEYLQDADKCRRFPSQDTPKSVDDSGGRGHRSLHDFAESSYLLKLKFVYTNPETLKGV 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02863 1352 ProSiteProfiles Zinc finger CW-type profile. 550 601 IPR011124 GO:0008270
Adu10g02863 1352 MobiDBLite consensus disorder prediction 65 89 - -
Adu10g02863 1352 Pfam SNF2-related domain 300 966 IPR000330 GO:0005524|GO:0140658
Adu10g02863 1352 Pfam CW-type Zinc Finger 555 598 IPR011124 GO:0008270
Adu10g02863 1352 Pfam Helicase conserved C-terminal domain 1175 1274 IPR001650 -
Adu10g02863 1352 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 739 868 IPR014001 -
Adu10g02863 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 736 908 IPR027417 -
Adu10g02863 1352 MobiDBLite consensus disorder prediction 66 86 - -
Adu10g02863 1352 PANTHER OS01G0952200 PROTEIN 87 1333 - -
Adu10g02863 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 289 378 IPR027417 -
Adu10g02863 1352 SMART helicmild6 1192 1274 IPR001650 -
Adu10g02863 1352 CDD SF2_C_SNF 1177 1284 - -
Adu10g02863 1352 Pfam F-box domain 255 289 IPR001810 GO:0005515
Adu10g02863 1352 Gene3D - 722 912 IPR038718 -
Adu10g02863 1352 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 87 1333 - -
Adu10g02863 1352 Gene3D - 550 604 - -
Adu10g02863 1352 SMART ultradead3 293 879 IPR014001 -
Adu10g02863 1352 CDD DEXDc_SHPRH-like 732 909 - -
Adu10g02863 1352 ProSitePatterns Zinc finger RING-type signature. 1046 1055 IPR017907 -
Adu10g02863 1352 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 810 1308 IPR027417 -
Adu10g02863 1352 Gene3D - 1080 1315 IPR027417 -
Adu10g02863 1352 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1168 1320 IPR001650 -
Adu10g02863 1352 SMART fbox_2 255 295 IPR001810 GO:0005515
Adu10g02863 1352 SUPERFAMILY F-box domain 251 288 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02863 Adu-Chr10 105155136 105162028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02863 738 1294 RAD5 or RAD16-like Gene Family AT5G22750 25.758 9.74e-43 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Adu10g02863 SNF2_N 3.6e-97 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02863 - - adu:107471940 2730.67