Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02849 ATGGAAGACAAAGACGAGGACAGTAATAACAACAAAAATAACAACCAACATCATCATAACCACCCAAAAGAAGAGCCACTAATAATAAGAAAACACAACACTATTGGGGGCGGGAGCGGCAGCGGCAGCGGCGGCGACAGATTAAAGAGAGATGAGTGGAGTGAAGGAGCGGTTTCCACCCTTCTAGAAGCATACGAATCAAAATGGGTTCTTAGAAACAGAGCAAAGCTCAAAGGCCATGACTGGGAAGATGTTGCAAGACACGTGTCATCAAGAGCCAACTCTACAAAATCGCCCAAGACACAAACGCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGCTACAGATCAGAGTCTGCTACCGCTGATGCTTCATCTTGGCCGTTATATTCACGCCTTGATCTTCTCTTGCGTGGGACGGGGCCTGTGCCCACTGCTTCCACGCTTGCAGCTTCGCCACTGAAACTGTCACCAACACTGCAGGCAGTGCCGGTGACAGTGACGGTGGCTGCTGCTGCAGCGACTGGTTCTCATCAGTCGCTGCACTTTAGCAATAACCAACAACCTTTGATGTTGTTGGAGCAGCCGCCGTCCTCACAAGCCCTCCATCAACCACCGCCACCTCCTGGTACTGTTGCTGCTCCTCCACCTCCTGCCACCACTGCGCAAAACTCGCATGGATCCAATGGCGTTGAGAGAGTGATAACCAAGGAAGATGGGTTATTAGGAACTAAGTCATGTGAGCATGTATCTAACAAGAATGAAGTAGAGACTGATAGCAGCACACCAGCACTGTACAGTGAAAAGGATAAGCTTAGATGCAACAAGAGGAAGATGAAGATGGAGAGCAACAAGCAGCGGCGGCGAAAGGAGGAGATGGAGATAGCAGGAAGCATAAGGTGGCTTGCAGAAGTTGTGGTGAGATCGGAGCAAGCAAGAATGGACACAATGAAGGAGATTGAAAAGATGAGGGTCGAAGCTGAGGCCAAGCGCGCCGAAATGGATCTCAAGAGAACTGAAATCATTGCCAATACACAGTTAGAGATTGCTAGAATCTTCGCAAGTGTTAATAACAAAGGTGTGGATTCATCGCTGAGAATCGGCAGAAGTTAA 1116 0.4875 MEDKDEDSNNNKNNNQHHHNHPKEEPLIIRKHNTIGGGSGSGSGGDRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARHVSSRANSTKSPKTQTQCKNKIESMKKRYRSESATADASSWPLYSRLDLLLRGTGPVPTASTLAASPLKLSPTLQAVPVTVTVAAAAATGSHQSLHFSNNQQPLMLLEQPPSSQALHQPPPPPGTVAAPPPPATTAQNSHGSNGVERVITKEDGLLGTKSCEHVSNKNEVETDSSTPALYSEKDKLRCNKRKMKMESNKQRRRKEEMEIAGSIRWLAEVVVRSEQARMDTMKEIEKMRVEAEAKRAEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02849 371 MobiDBLite consensus disorder prediction 1 51 - -
Adu10g02849 371 MobiDBLite consensus disorder prediction 1 30 - -
Adu10g02849 371 MobiDBLite consensus disorder prediction 201 217 - -
Adu10g02849 371 Gene3D - 53 118 - -
Adu10g02849 371 Coils Coil 314 343 - -
Adu10g02849 371 Pfam Myb/SANT-like DNA-binding domain 50 136 IPR044822 -
Adu10g02849 371 Coils Coil 277 297 - -
Adu10g02849 371 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 34 367 - -
Adu10g02849 371 MobiDBLite consensus disorder prediction 198 231 - -
Adu10g02849 371 MobiDBLite consensus disorder prediction 246 268 - -
Adu10g02849 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 34 367 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02849 Adu-Chr10 105036119 105040152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02849 36 353 Trihelix Transcription Factor Family AT3G14180 24.576 6.33e-21 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Adu10g02849 Myb_DNA-bind_4 9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02849 - - adu:107471869 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02849 10 105036119 105040152 Adu10g02849 10 105036119 105040152 ECH