Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02823 ATGGGAGGAGAGAAGAAGAGAATAGAGAAGCAGAAGAAGAAGTCAAAATCATCAGGGGGCTTCGAATCTCTGAATCTAAACCCCAATGTATTCAAAGCAATCAAACGCAAAGGCTACAAAGTCCCCACTCCAATTCAAAGGAAGACGATGCCTCTCATCCTCTCCGGCCACGACGTCGTCGCCATGGCCCGCACTGGTTCCGGCAAAACGGCAGCGTTTCTTGTCCCAATGCTCCACCGGCTCAACCAGCATGTCCCTCAGTCCGGTGTTAGAGCCCTCATATTGTCCCCTACAAGGGACTTGGCTCTTCAAACCCTAAAATTCACCAAAGAGCTTGGTCACTTCACTGATCTTAGGGTTAGTTTGTTAGTTGGCGGTGACAGCATGGAGAGCCAGTTTGAGGAACTGGCTCAGAGCCCTGACATTATAATTGCCACACCTGGTAGGCTTATGCACCATTTGTCTGAGGTAGACGACATGTCGTTGCGTACCGTTGAGTATGTTGTTTTTGATGAGGCTGATTGTTTGTTTGGGATGGGTTTTGCTGAGCAGTTGCACCAGATTCTTTCGCAGCTCGGCGAGAATCGCCAGACGCTGTTATTTAGCGCTACTATGCCCAGCGCGCTCGCAGAGTTTGCGAAGGCCGGCCTGCGAGATCCTCAGCTTGTGAGGCTTGATTTGGAGACTAAAATTAGCCCTGATTTGAAGACTGTGTTTTTTACTTTGAGACAGGAAGAGAAGTATGCTGCATTGTTGTATTTGGTTAGGGAAAGGATTGGTTCGGATCAGCAGACATTGATTTTTGTATCCACAAAACACCATGTTGAGTTTTTGAATATACTGTTTAGAGAAGAAGGGATTGAACCATCTGTGTGTTATGGTGACATGGATCAAGATGCCCGAAAAATACATGTATCAAGGTTTAGGTCGAGGAAGACGATGCTGTTGATTGTGACGGATGTTGCAGCTCGTGGCATTGATATTCCGTTGCTTGATAATGTTATCAATTGGGACTTCCCACCAAAGCCCAAGATATTCGTTCATCGTGTTGGAAGGGCTGCAAGGGCTGGCCGTACTGGCACTGCTTATTCCTTCGTGACACCGGAGGATATGGCTTACCTATTGGATCTTCATTTGTTTCTGTCGAAGCCGATAAAAGCTGCTCCCACCGAAGAAGAGGTCTTGCAGAATATGACTGGAGTAATGTCGAAAATTGAACAGGCAATGGCAAATGGAGAAACTGTTTATGGCCGATTCCCTCAAACAGTCCTTGACCTTGTTTCAGATAGAGTTAGGGAAATTATTGATACTAATGCAGAATTGGAGTCATTGCAGAGAACCTGTAACAATGCATTCCGTTTATATATGAAGACAAAACCCTTACCATCCAAGGAGTCTATTCGAAGAGTAAAGGATTTGCCACGTGAGGGTCTGCATCCGATGTTCAAGAATGTATTGGAAACTGGGGAGTTAATGGCCCTTGCATTTTCAGAGCATTTGAAAAAGTTTAGGCCAAAGCAGACTATCTTGGAAGCTGAAGGGGAAGCAGCTAAATCAAAGCATGTACAGGGTCCTTCCGGTCAATGGGTTGATGTGATGAAAAGGAAGAGAGCCATTCATGAGAATATTATAAATTTGGTTCATGAACAGCAGTCTAAAAGTACTGTGGAACAGGAGGAAATTCAACCAGAAGATATTCCTTCCACTGGAAAAGGGAGAAAAGCATCTGGTTCTAAGAGAAAGCAACAGAGTTTCATGGATGAGGAATACTATATAAGTTCAGTACCTAAAAATCAACACATGGAGGCTGGCCTTTCTGTGAAAGCTAATGAAGAATTTGCCGCGAACAGATTGGATTCTGCTGTTTTAGATCTGGTTGCAGATGATAGTACTGGCATTCAGAAACAAAGATCTGTATATCACTGGGATAAGGTAATGCTGAGCAGTTTAAATAATGGTGACCGTGTTGCAGCAAATGGAAAGATAAAGACAGAGAGTGGTGCAAAAACAAAGGCCACCAAGACAGGCATATATAAGAAGTGGAAAGAGCGCTCACACACTAAGGTATCTCTTAAGGGGACAAATAATGATGGTGATGCTCAAGAATCCACAAGTTTTAAAGGATCTTACAGAGGAAGAGGTAGGAATTTCAAAGGCGGTAGTAAGAGGCAGCAATCAATGCCCAATTCTCATGTTCGTTCAGAGATCAAAGAATTTGATCAAATTCGAAAGGAGAGGCAGAAAAAGGCTGACAGGATTTCACATTTGAAGAGCAAGTCAGCAAAAGGTAAAAAGTTTGGTAAAAATGGAAAGAAAAGAAGAGCTAAATAG 2331 0.4372 MGGEKKRIEKQKKKSKSSGGFESLNLNPNVFKAIKRKGYKVPTPIQRKTMPLILSGHDVVAMARTGSGKTAAFLVPMLHRLNQHVPQSGVRALILSPTRDLALQTLKFTKELGHFTDLRVSLLVGGDSMESQFEELAQSPDIIIATPGRLMHHLSEVDDMSLRTVEYVVFDEADCLFGMGFAEQLHQILSQLGENRQTLLFSATMPSALAEFAKAGLRDPQLVRLDLETKISPDLKTVFFTLRQEEKYAALLYLVRERIGSDQQTLIFVSTKHHVEFLNILFREEGIEPSVCYGDMDQDARKIHVSRFRSRKTMLLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAYSFVTPEDMAYLLDLHLFLSKPIKAAPTEEEVLQNMTGVMSKIEQAMANGETVYGRFPQTVLDLVSDRVREIIDTNAELESLQRTCNNAFRLYMKTKPLPSKESIRRVKDLPREGLHPMFKNVLETGELMALAFSEHLKKFRPKQTILEAEGEAAKSKHVQGPSGQWVDVMKRKRAIHENIINLVHEQQSKSTVEQEEIQPEDIPSTGKGRKASGSKRKQQSFMDEEYYISSVPKNQHMEAGLSVKANEEFAANRLDSAVLDLVADDSTGIQKQRSVYHWDKVMLSSLNNGDRVAANGKIKTESGAKTKATKTGIYKKWKERSHTKVSLKGTNNDGDAQESTSFKGSYRGRGRNFKGGSKRQQSMPNSHVRSEIKEFDQIRKERQKKADRISHLKSKSAKGKKFGKNGKKRRAK 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02823 776 MobiDBLite consensus disorder prediction 685 776 - -
Adu10g02823 776 MobiDBLite consensus disorder prediction 733 757 - -
Adu10g02823 776 CDD SF2_C_DEAD 242 366 - -
Adu10g02823 776 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 234 396 IPR001650 -
Adu10g02823 776 MobiDBLite consensus disorder prediction 758 776 - -
Adu10g02823 776 SMART helicmild6 276 357 IPR001650 -
Adu10g02823 776 MobiDBLite consensus disorder prediction 550 582 - -
Adu10g02823 776 Pfam DEAD/DEAH box helicase 43 210 IPR011545 GO:0003676|GO:0005524
Adu10g02823 776 Pfam DBP10CT (NUC160) domain 624 683 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Adu10g02823 776 Pfam Helicase conserved C-terminal domain 247 357 IPR001650 -
Adu10g02823 776 MobiDBLite consensus disorder prediction 553 567 - -
Adu10g02823 776 Gene3D - 236 471 IPR027417 -
Adu10g02823 776 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 19 47 IPR014014 GO:0003724
Adu10g02823 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 375 IPR027417 -
Adu10g02823 776 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 4 773 - -
Adu10g02823 776 Gene3D - 3 226 IPR027417 -
Adu10g02823 776 SMART ultradead3 38 239 IPR014001 -
Adu10g02823 776 MobiDBLite consensus disorder prediction 1 21 - -
Adu10g02823 776 MobiDBLite consensus disorder prediction 691 710 - -
Adu10g02823 776 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 50 223 IPR014001 -
Adu10g02823 776 SMART DBP10CT_2 624 684 IPR012541 GO:0003723|GO:0003724|GO:0005524|GO:0005634
Adu10g02823 776 CDD DEADc_DDX54 19 224 - -
Adu10g02823 776 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 29 4 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02823 Adu-Chr10 104814237 104818971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02823 21 390 Eukaryotic Initiation Factors Gene Family AT1G72730 32.258 1.67e-58 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02823 K14808 - gmx:100806274 1261.51