Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02817 ATGGTGGCAAGAAATGGTTCTAATGATGATCTCAAATATGAAAAACATCAAGCATCAAACCTCCACAAAAATTCCCATATGCTAGAATTTGTGAAGTTAGCCAATGATAGTTCAATTCATGGATCCAAAGTAGTGGAAGAACATGATTTTTTCCACATAGAGCACAAGACATCATCAAATAATTTAGAGGCAAAGGCTTTTTCATGCAACTATTGTAAGAAGGAGTTCTCTTCTTCACAAGCATTAGGAGGGCACCAGAATGCACATAAACAAGAGCGCGCGTTAGCGAAATGTTGCCGAGAGATTGATGCTGGTGTTTTTGGTTACCCTTATTGTTTTTCCTATCACCCTTACCCTAGCTTTCCCACACACCATTTTTGTGGTTCTTCTTATAACAATAATAATACTATTAGGGCACTTGGAGTTAGGGTGGAATCCATGATTCATAAGCCAAATTTATGTCCCAATAAATGGAGTGGAATCATGATGAGACATACAAAGAAGCCAGAAAGCCCCTCTAGCTCTATGCTTGATTTGTCACTTAAGCTCTAA 552 0.3822 MVARNGSNDDLKYEKHQASNLHKNSHMLEFVKLANDSSIHGSKVVEEHDFFHIEHKTSSNNLEAKAFSCNYCKKEFSSSQALGGHQNAHKQERALAKCCREIDAGVFGYPYCFSYHPYPSFPTHHFCGSSYNNNNTIRALGVRVESMIHKPNLCPNKWSGIMMRHTKKPESPSSSMLDLSLKL 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02817 183 Gene3D Classic Zinc Finger 40 103 - -
Adu10g02817 183 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 94 IPR013087 -
Adu10g02817 183 SUPERFAMILY beta-beta-alpha zinc fingers 64 94 IPR036236 -
Adu10g02817 183 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 10 159 IPR044246 GO:0009788
Adu10g02817 183 Pfam C2H2-type zinc finger 66 91 - -
Adu10g02817 183 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Adu10g02817 183 PANTHER ZINC FINGER PROTEIN 3-LIKE 10 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02817 Adu-Chr10 104765854 104766405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02817 20 150 C2H2 Transcription Factor Family AT5G25160 41.353 1.42e-20 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Adu10g02817 zf-C2H2_6 2.4e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02817 - - ahf:112786570 348.206