Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02744 ATGCCAACAAACGAGACAGGTACATACGGCGGCCATTCTTATCAAAATCGTGGAGACATTGAAGATAAACGAATGGAAATTGAATTCCAGCAAGCAAAGCAGTACTCAGTGAAAGATTCCAGCAAGCAAAAAGCAAGAAAAAGAAACAAGAAGAGTAGTAAGTTTGTTGGAGTGAGACAGAGAGCTTCAGGGAGATGGGTAGCTGAGATCAAAGACACAACGCACAACATCAGAATGTGGCTTGGCACTTATCAGACTGCAGAGGAAGCGGCCAGAGCCTACGACGAAGCCGCGCGTCTTCTTCGCGGCTCCGCTGCTCGGACCAACTTCATCACTCATCATTTCTCGTCGTCCTTGGATTCTCCTGTCGCTTCCCGGATTCGGAATCTTTTGAACAGCAAAAAGGGAATCAGCAGCAGTGATGAGATCATTGAGAACTCATCATCATCATCATCGCTTTCGAGTTCGAGTGAGACAATTGTTACAGAAAGCACACCAACAATTCTATCTGATGATAATGCTTATAGACCAGATTTGAGTAGTTTTGAAAGACAAGTATCAGGTTCAGGTTCAGGTTCTGGTTCACCTTATGCAATTCATGGGGTTCATGGATTCATGGATGCTTTTCAAGTTAAGGACTCTAACGAATCTCTCTGGGATCTTCCACCTTTGATGAGCTCGTTTTTCCCTTAA 693 0.443 MPTNETGTYGGHSYQNRGDIEDKRMEIEFQQAKQYSVKDSSKQKARKRNKKSSKFVGVRQRASGRWVAEIKDTTHNIRMWLGTYQTAEEAARAYDEAARLLRGSAARTNFITHHFSSSLDSPVASRIRNLLNSKKGISSSDEIIENSSSSSSLSSSSETIVTESTPTILSDDNAYRPDLSSFERQVSGSGSGSGSPYAIHGVHGFMDAFQVKDSNESLWDLPPLMSSFFP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02744 230 MobiDBLite consensus disorder prediction 1 56 - -
Adu10g02744 230 PRINTS Ethylene responsive element binding protein signature 77 93 IPR001471 GO:0003700|GO:0006355
Adu10g02744 230 PRINTS Ethylene responsive element binding protein signature 55 66 IPR001471 GO:0003700|GO:0006355
Adu10g02744 230 MobiDBLite consensus disorder prediction 141 165 - -
Adu10g02744 230 SUPERFAMILY DNA-binding domain 53 111 IPR016177 GO:0003677
Adu10g02744 230 Pfam AP2 domain 53 103 IPR001471 GO:0003700|GO:0006355
Adu10g02744 230 CDD AP2 53 110 IPR001471 GO:0003700|GO:0006355
Adu10g02744 230 ProSiteProfiles AP2/ERF domain profile. 54 111 IPR001471 GO:0003700|GO:0006355
Adu10g02744 230 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 33 167 - -
Adu10g02744 230 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 33 167 - -
Adu10g02744 230 SMART rav1_2 54 117 IPR001471 GO:0003700|GO:0006355
Adu10g02744 230 Gene3D AP2/ERF domain 53 112 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02744 Adu-Chr10 104056416 104057610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02744 40 230 AP2-EREBP Transcription Factor Family AT5G19790 35.714 5.57e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Adu10g02744 AP2 5.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02744 K09286 - gmx:100796898 152.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Adu10g02744 10 104056416 104057610 Adu10g02744 10 104056416 104057610 ECH
Adu10g02744 10 104056416 104057610 Adu10g02744 10 104056416 104057610 PCT