Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02717 ATGGCTTCCTCTATTTCCTCTGATATCCGTTTCTTCAAGATTGGTCTCAAAAAAAGCCTTGAAGATGGAAACCTTAAGTTAACAAAAAAGTTCAGTAAGGAATATGGTGATAGTGTTCCAAATCCAGTGTATCTGAAGCCTCCAGATGGCACTGCATGGAAGATAGATTGGTCTTTGTATGATGGTTTGATTCAATTTGAAAATGGTTGGAAAGAATTTGCTTCATATTACTCTTTGGATAATGGCCATCTGCTGCAATTTGCGTACAATGAAACTTCGAACATTGAAGTACAAATTTTTGACATCATTGATGGCTCTGAAATCAACTATCCTTCCTTGGATCACATCGGCGATGACAATTCGATTGAGATCTTGAATGAACTGCCGCCACGAGGCTGGCCGAGGAAAAAACTGAAAGCAGCAGCAGAAGTATCATCTCCTTCTACAAGTAAAATATTGAGGAGTTCTGTCAAAACTGGAGATGTAGAAAAGGGCCCTGATAAACAAAACTGGATGCAGTGTTGCAACAATGAAGAAGCTAGTCAATCTGAAGAGACAGGTCTTAAGAATTAA 573 0.3892 MASSISSDIRFFKIGLKKSLEDGNLKLTKKFSKEYGDSVPNPVYLKPPDGTAWKIDWSLYDGLIQFENGWKEFASYYSLDNGHLLQFAYNETSNIEVQIFDIIDGSEINYPSLDHIGDDNSIEILNELPPRGWPRKKLKAAAEVSSPSTSKILRSSVKTGDVEKGPDKQNWMQCCNNEEASQSEETGLKN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02717 190 CDD B3_DNA 10 101 IPR003340 GO:0003677
Adu10g02717 190 MobiDBLite consensus disorder prediction 139 190 - -
Adu10g02717 190 SUPERFAMILY DNA-binding pseudobarrel domain 5 101 IPR015300 -
Adu10g02717 190 PANTHER B3 DOMAIN-CONTAINING 7 181 - -
Adu10g02717 190 MobiDBLite consensus disorder prediction 170 190 - -
Adu10g02717 190 ProSiteProfiles B3 DNA-binding domain profile. 10 103 IPR003340 GO:0003677
Adu10g02717 190 Gene3D - 4 102 IPR015300 -
Adu10g02717 190 Pfam B3 DNA binding domain 13 101 IPR003340 GO:0003677
Adu10g02717 190 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 181 - -
Adu10g02717 190 SMART B3_2 11 103 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02717 Adu-Chr10 103791971 103792956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02717 10 124 B3 DNA Binding Superfamily AT4G01580 36.134 2.32e-14 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02717 B3 2.3e-07 CL0405