Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02716 ATGGCTCCCTCTAACTATCAACAAAACAAGCATTCTCCTTCTAGTTCTACTGTCATCCGTTTCTTTAAGATTATCGTCAGAGAAAGTCTTCAAGATGAAAACTTTATGTTACCAAAAAAGTTCACCAGAAAATATGGTTCTGGCCTATCAAACCCACTATATCTTAAGCCTCCAGATGGAACTGAATGGAGAGTAGATTGGACCAATCGTAATGGTAGAACTTTGTTTAAAAGAGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATCATGGCCATGTGTTATGGTTTGAGTATAATATTGGAACTTCTCACATTGAAGTAGAAATATTTGACATGAGTTGCCTCGAAATAGAGTATCCTGCCAATGATCAGATCAAAAAGCACCCGCCACAACACAGGGGCCAGTCGGTGAAAAGGCCAAAAGAACAACAAACTAGAGACGTGGATAACAGTCCCAACACTCAAAACATGAGACTTAACGAGGGACGGCAGAAGAAAAGATTAAATGAACCACTGTCAGGAGGAGTCCGGGGCCAACCGAGGAAAAAACTGAGAGCACCAGTATCATCTGCTTCTAAAGGTAGACAGTTGGAAAATGACGCACAAATCAGGAAAGGTATTAAATCTGAAAAGAAAAACCATAAGATGACAGTGTCTGTCAATCAAGATTCTAATGGTAAAAGTAATAGAAGAAGAAAAGATTCTGAATCTTCTGTTAGGCCCTATCCTGCAAAACCTGAATCTCTGAAAGAAGCTAACAAGTTCAAGTGGGAAAAGCCCTCTTTCATCATCAAGATAAAGCAACTGTCTCAAACAAAAGCACCATGTTACTTTTCAACTAAATTCTTCCGGAAGTATTTTGAAAATAATCCACAAAATGCAAATATAAGGTTTGGAAAGAAGTTGTTCCCTGTTAAGTTGATCTATAGGCCATCATCATGTAATGCCTTTATCTCTGCTGGTTGGAACTTTTTTGCTCGAGCTAGTAAATTACAAGCCGGAGATGTTTGTTTGTTTAAGCTCGTCAACAGAAAAGATCCCGTGCTTGATGTTCATATTTGTCGTCGACAACGTCGCGAGTCACTTTCCAAACCAGTGACTCGTGGAATTCAGCTCCTGAAAGAAGTTAAGGAGCTCAATTCACAGAATCCCTCTTTCATGGTTAAGATAAAAGACAGTGATCCAAGAAGATCAAGGCCTAATTTATCAGCTATCTTCTACAGAAAATATTTTAAAAAGAATCAGCAGAATGTAAAGTTACAGTTCGGAAAGGAGATGTGGCCTGTTACGATAATCTACAATCCGTCGTCAAGAAACACCTTTATTTCGGCTGGTTGGAGCTCTTTTGCTAGAGCAAGTAAATTAGAAACTGGAGATGTTTGTGTTTTTGAGCTCATCAATGAAAAAGATCTATTTAATGTTCATATCTGTAGAGTTCAATGCTAG 1449 0.3844 MAPSNYQQNKHSPSSSTVIRFFKIIVRESLQDENFMLPKKFTRKYGSGLSNPLYLKPPDGTEWRVDWTNRNGRTLFKRGWKEFVAYYSLDHGHVLWFEYNIGTSHIEVEIFDMSCLEIEYPANDQIKKHPPQHRGQSVKRPKEQQTRDVDNSPNTQNMRLNEGRQKKRLNEPLSGGVRGQPRKKLRAPVSSASKGRQLENDAQIRKGIKSEKKNHKMTVSVNQDSNGKSNRRRKDSESSVRPYPAKPESLKEANKFKWEKPSFIIKIKQLSQTKAPCYFSTKFFRKYFENNPQNANIRFGKKLFPVKLIYRPSSCNAFISAGWNFFARASKLQAGDVCLFKLVNRKDPVLDVHICRRQRRESLSKPVTRGIQLLKEVKELNSQNPSFMVKIKDSDPRRSRPNLSAIFYRKYFKKNQQNVKLQFGKEMWPVTIIYNPSSRNTFISAGWSSFARASKLETGDVCVFELINEKDLFNVHICRVQC 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02716 482 SMART B3_2 263 358 IPR003340 GO:0003677
Adu10g02716 482 SMART B3_2 21 114 IPR003340 GO:0003677
Adu10g02716 482 SMART B3_2 387 481 IPR003340 GO:0003677
Adu10g02716 482 Gene3D - 371 481 IPR015300 -
Adu10g02716 482 Gene3D - 244 359 IPR015300 -
Adu10g02716 482 PANTHER B3 DOMAIN-CONTAINING 14 356 - -
Adu10g02716 482 PANTHER B3 DOMAIN-CONTAINING 365 480 - -
Adu10g02716 482 MobiDBLite consensus disorder prediction 125 147 - -
Adu10g02716 482 MobiDBLite consensus disorder prediction 125 248 - -
Adu10g02716 482 MobiDBLite consensus disorder prediction 199 218 - -
Adu10g02716 482 ProSiteProfiles B3 DNA-binding domain profile. 428 481 IPR003340 GO:0003677
Adu10g02716 482 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 365 480 - -
Adu10g02716 482 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 14 356 - -
Adu10g02716 482 CDD B3_DNA 278 356 IPR003340 GO:0003677
Adu10g02716 482 SUPERFAMILY DNA-binding pseudobarrel domain 17 121 IPR015300 -
Adu10g02716 482 MobiDBLite consensus disorder prediction 227 241 - -
Adu10g02716 482 SUPERFAMILY DNA-binding pseudobarrel domain 380 480 IPR015300 -
Adu10g02716 482 Gene3D - 14 115 IPR015300 -
Adu10g02716 482 ProSiteProfiles B3 DNA-binding domain profile. 304 358 IPR003340 GO:0003677
Adu10g02716 482 CDD B3_DNA 385 479 IPR003340 GO:0003677
Adu10g02716 482 Pfam B3 DNA binding domain 21 112 IPR003340 GO:0003677
Adu10g02716 482 Pfam B3 DNA binding domain 401 480 IPR003340 GO:0003677
Adu10g02716 482 Pfam B3 DNA binding domain 277 358 IPR003340 GO:0003677
Adu10g02716 482 ProSiteProfiles B3 DNA-binding domain profile. 20 114 IPR003340 GO:0003677
Adu10g02716 482 CDD B3_DNA 20 112 IPR003340 GO:0003677
Adu10g02716 482 SUPERFAMILY DNA-binding pseudobarrel domain 257 357 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02716 Adu-Chr10 103788041 103791178 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02716 374 472 B3 DNA Binding Superfamily AT3G18990 33.000 2.08e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02716 B3 5.6e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02716 - - adu:107471893 789.26