Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02712 ATGACTTCCTCTAACTATCAACAAAACGAGCATTCTCCTTCTAATTCTTCTGTGATCCGTTTCTTCAAGGTTATCCTCAGAAAAACTCTTCAAGATGAAAACTTTAAGTTACCAAAAAAGTTCACTAGAAAATATGGTTCTGACCTATCAAACCCATTGTATCTTAAGCCTCCGGATGGTACTGAATGGAGAGTAGATTGGATCATTCATGATGGTGGAATTTTGTTTAAAGAAGGTTGGAAAGAGTTTGTTGCATATTACTCTCTTGATGATGGCCATGTGTTATGGTTTGAGTATAATATTGGAACTTCTCGCATTGAAGTACAAATATCTGACATGAGTGGCCTCCAAATAGAGTATCCTGTCAATGATCAGATCAAAGAGCACCCGCCACAACACAGGGGCGAGCCGGTGGAAAGGCCAAAAGAACAACAAACTAGAGATGTGGATAGCAGTCCCAACACTCAAAACATGAGATTTAACGAGTTGGAAAATGACACACAAATCAGGGAAGGTATTAAATTTGAAAAGAAAAACCATAAGATGCCAGTGTCTATCAATCAAGATTCTAATGGCAAAAGAAATAGAAAAAGAAAAGATTCTGAATCTTCTGTTAGTCCCTGTCTTGCAAGACCTGAATCTCTGAAAGAAGCTAAGAAGTTCAAGTGGGAAAAGCCCTCTTTCATCATCAAGATAAAGCAACTGTCTCAAACGAGAGCACCACGTTACTTTCCAACTAAATTCTTCAGGAAGTATTTTGTAAATAATCCACAAAATGCTAATATAAGGTTTGGAAAGAAGTTGTTCCATGTTAAGTTGATCTATAGGCCATCATCATGTGATGCCTTTATGTCTGCTGGTTGGAACTTTTTTGCTCGAGCTAGTAAATTACAAGCCGGAGATGTTTGTTTGTTTAAGCTCGTCAATAGAAAAGATCCAGTGCTTGATGTTCATATTTGTCGTCGACAACGCCGCGAGTCACTTTCCAAATCAGTGACTCATGAGATTCAGCTCCTGAAAGAAGTTAAGGAGCTCAATTCACAGAATCCCTCTTTCATGAACTTATCAGCTATCTTTTACAGAAAATATTTTAAAAAGAATCAGCAGAATGTAAAGTTGCAGTTCGGAAAGGAGCTCGTAATTCTTAGACAAGTTAATTTTGTGAAGAATGTATCACCTTTCTTTTGTTGA 1191 0.3745 MTSSNYQQNEHSPSNSSVIRFFKVILRKTLQDENFKLPKKFTRKYGSDLSNPLYLKPPDGTEWRVDWIIHDGGILFKEGWKEFVAYYSLDDGHVLWFEYNIGTSRIEVQISDMSGLQIEYPVNDQIKEHPPQHRGEPVERPKEQQTRDVDSSPNTQNMRFNELENDTQIREGIKFEKKNHKMPVSINQDSNGKRNRKRKDSESSVSPCLARPESLKEAKKFKWEKPSFIIKIKQLSQTRAPRYFPTKFFRKYFVNNPQNANIRFGKKLFHVKLIYRPSSCDAFMSAGWNFFARASKLQAGDVCLFKLVNRKDPVLDVHICRRQRRESLSKSVTHEIQLLKEVKELNSQNPSFMNLSAIFYRKYFKKNQQNVKLQFGKELVILRQVNFVKNVSPFFC 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02712 396 ProSiteProfiles B3 DNA-binding domain profile. 227 323 IPR003340 GO:0003677
Adu10g02712 396 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 14 321 - -
Adu10g02712 396 Gene3D - 14 115 IPR015300 -
Adu10g02712 396 Pfam B3 DNA binding domain 241 323 IPR003340 GO:0003677
Adu10g02712 396 Pfam B3 DNA binding domain 21 109 IPR003340 GO:0003677
Adu10g02712 396 MobiDBLite consensus disorder prediction 164 183 - -
Adu10g02712 396 ProSiteProfiles B3 DNA-binding domain profile. 20 114 IPR003340 GO:0003677
Adu10g02712 396 SUPERFAMILY DNA-binding pseudobarrel domain 222 322 IPR015300 -
Adu10g02712 396 SMART B3_2 21 114 IPR003340 GO:0003677
Adu10g02712 396 SMART B3_2 228 323 IPR003340 GO:0003677
Adu10g02712 396 CDD B3_DNA 226 321 IPR003340 GO:0003677
Adu10g02712 396 Gene3D - 210 325 IPR015300 -
Adu10g02712 396 SUPERFAMILY DNA-binding pseudobarrel domain 15 114 IPR015300 -
Adu10g02712 396 MobiDBLite consensus disorder prediction 148 163 - -
Adu10g02712 396 MobiDBLite consensus disorder prediction 126 147 - -
Adu10g02712 396 MobiDBLite consensus disorder prediction 126 211 - -
Adu10g02712 396 PANTHER B3 DOMAIN-CONTAINING 14 321 - -
Adu10g02712 396 CDD B3_DNA 20 112 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02712 Adu-Chr10 103761962 103765069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02712 21 321 B3 DNA Binding Superfamily AT3G18990 26.946 6.79e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Adu10g02712 B3 8.1e-13 CL0405