Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02687 ATGACAAAAGTGAAAGCAACTGAGCAACCAGGGATAATCATGGACACAATCCAAGAGATTCAAGAGCGGCATGACACACTGATTGATATAGAGAGGATCCCCAATGAACTTCATCAAGTGTTCTTGGACATGGCTGTTTTGGTCCAATCACAAGGTAAGGAACTCAATGACATAGAGAACCACGTGGCAAGAGCAAATTCGTACGTCTGCGGTGGGTCCAGCAGTTGCAGTTTGCAAGGAAGCACCAGAAGAATTCCGGAAGTCCACCTTCATTGGCAATTTGGCATCATAATATTGATCATCATCATATTGATTATAGTCCTTCTGTCAAGAGAAATCAAGAGAAATCAAGTCAACATATTCTGTTAG 369 0.4201 MTKVKATEQPGIIMDTIQEIQERHDTLIDIERIPNELHQVFLDMAVLVQSQGKELNDIENHVARANSYVCGGSSSCSLQGSTRRIPEVHLHWQFGIIILIIIILIIVLLSREIKRNQVNIFC 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02687 122 PANTHER SYNTAXIN 10 110 IPR045242 -
Adu10g02687 122 SMART tSNARE_6 12 81 IPR000727 -
Adu10g02687 122 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 17 69 IPR000727 -
Adu10g02687 122 PANTHER SYNTAXIN-121 10 110 - -
Adu10g02687 122 SUPERFAMILY t-snare proteins 12 72 IPR010989 GO:0016020|GO:0016192
Adu10g02687 122 Pfam Syntaxin 8 52 IPR006011 GO:0016020
Adu10g02687 122 CDD SNARE_syntaxin1-like 16 72 - -
Adu10g02687 122 Gene3D - 12 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02687 Adu-Chr10 103524485 103524999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02687 11 109 SNARE and Associated Proteins AT1G61290 46.465 7.32e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02687 K08486 - ahf:112772691 132.88