Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02592 ATGTTTCCTTCCACTACTTACAGTTACAGCACTGGCCCTTACCCTTGCTTCCCTTCATCTTCTTCTTCGTATCCTCTTTTTCCTTTTCTCAACCCTGAGAACAATGCTTCTTCTTCTTCTGCAACAACCGCCACTAACAACAACAACAACAATAATCTCCTTCATGATCCATCGCTCTGCGTTCCTTACATTCCAATCCCTGAAGCACTAACCAATTTGGCAACAGTTGTAGATAACACTACTAATCTTGCTGCATCTTCATCAATGCCCAAACAACAGGACCTCAACGGTGGCGGTGGCGGAGGTGCTCATCATCACTTCGGCATATCCAGTTTGCTCACGAAGAAACCGGCGGCGGCGAAGAAAGATAGGCACAGCAAGATTTACACCGCTCAGGGGCTGAGGGACCGAAGGGTGAGGCTGTCGATCGAGATCGCGCGCAAGTTCTTCGATCTCCAAGACATGCTAGGGTTTGATAAGGCCAGCAACACGCTCGACTGGCTCTTCACCAAGTCCAAGAAAGCCATTAAGGAGCTTGCCAGGAGCAAGAACCACAGCGCCAGTGACGAAGCCGAAGCCGGTGCCGGCGCCGGTGCCAATAACAAGAGTTTCGCCTCGTCTTCTGACTGCGACGAAAATGACTTTGAAGTACTTTCTAGAAACAACCACCACCGCCACCAACAAGGGTCAGATGCCAGGGAGAGGAAGCTGAAAAATGCACAACAGAAAGAAGCAAGTGCTTGTAATGTGAGGGCAAAGATGAAGGAGTCAAGGGAGAAAGCAAGAGCAAGAGCAAGAGAAAGGACTAGTAACAAGATGTGTAACAGCATAATGGGAAATTCTTCTTCTTCTTCCGGGAAGGTTCTAGAATTAAAGAAAAGATGCCCTGCACCTAGTGAAAACCCTCACCACCTAGGTGGTGCTGAAGTTTCACAAACTAGAGATGACTTCAACGTTATTGAGGAATCCATTGTGATCAAGAGGAAGTTAAAGCAGCCATCTATGATGTCATCCTCACATCACCATCACCATCACCACCACCAATTAAACCTTCCCATCCCTAACAATAATAAGGAAGCAAGTTTCAACAACAACAGCGATAATTACCATCCAGGAAACTACACCAATTTGTCACCAAATTGGGATAATGCTAATGGACCAGCCTCAACGGCTAATAACCGCTCCAACTTCTGTGCAATAGCCAGCATGAATCTCTCTACAGGGCTACAAATCTTTGGAAAGTCATGGGAGGAATGCACCAATCCATCACGTCTGCACTAG 1281 0.4699 MFPSTTYSYSTGPYPCFPSSSSSYPLFPFLNPENNASSSSATTATNNNNNNNLLHDPSLCVPYIPIPEALTNLATVVDNTTNLAASSSMPKQQDLNGGGGGGAHHHFGISSLLTKKPAAAKKDRHSKIYTAQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELARSKNHSASDEAEAGAGAGANNKSFASSSDCDENDFEVLSRNNHHRHQQGSDARERKLKNAQQKEASACNVRAKMKESREKARARARERTSNKMCNSIMGNSSSSSGKVLELKKRCPAPSENPHHLGGAEVSQTRDDFNVIEESIVIKRKLKQPSMMSSSHHHHHHHHQLNLPIPNNNKEASFNNNSDNYHPGNYTNLSPNWDNANGPASTANNRSNFCAIASMNLSTGLQIFGKSWEECTNPSRLH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02592 426 MobiDBLite consensus disorder prediction 182 205 - -
Adu10g02592 426 Pfam TCP family transcription factor 120 275 IPR017887 -
Adu10g02592 426 ProSiteProfiles R domain profile. 255 272 IPR017888 -
Adu10g02592 426 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 24 424 - -
Adu10g02592 426 MobiDBLite consensus disorder prediction 221 256 - -
Adu10g02592 426 MobiDBLite consensus disorder prediction 221 241 - -
Adu10g02592 426 ProSiteProfiles TCP domain profile. 121 179 IPR017887 -
Adu10g02592 426 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 424 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02592 Adu-Chr10 102630667 102632826 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02592 119 274 TCP Transcription Factor Family AT1G67260 44.231 5.18e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Adu10g02592 TCP 6e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02592 - - gmx:100801549 331.257