Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Adu10g02558 ATGGGGTTCTCAAGAACTGCAGAATCTACACTTCTTCTTGTGGCATTCTTCTGTCTTCTGAGATCTGCACATGCTTTACTTTCTCCCAAAGGAATCAACTTTGAAGTGCAAGCTTTAATGGCCATAAAAGCTTCTCTAGTGGACCCTCATGGCATTTTGGACAATTGGGATGGAGATGCAGTTGATCCATGTAGCTGGAACATGGTCACATGTTCTCCTCAGAGCTTTGTCATTAGCTTAGGAATTCCAAGTCAGAATTTATCTGGTACTCTATCACCAAGCATTGGAAACCTAACAAACCTTCAGAGTGTTGTGCTGCAAAATAATAACATAACTGGACCAATCCCTTCAGAGCTAGGCAAACTTTCCATGCTTCAAACACTTGATCTCTCCAATAACTTATTTAATGGGGAAATTCCTCAATCTCTTGGTCATCTCAGAACACTTCAGTACTTGAGGCTTAATAATAACAGTTTTTCTGGGGAGTGTCCTGTGTCAGTGGCTAACATGGCTCAGCTTTCTTTTCTTGACTTGTCCTACAATAATCTAAGTGGATCTGTACCAAGAATTTTGGCCAAATCATTCAGCATTGTTGGAAACCCCCTTGTATGCACAACAGCAAAAGAAACAAACTGCCATGGAATGACACTGATGCCTATGTCCATGGACTTAAACACTACTCAGAGTGCTTCACTATCAGGCACACAGAAAACTCACAAAATCGCCATCGCTTTCGGCTTAAGTCTTGGATGCCTCTCCTTTATAGCTCTTGTCTTTGGACTTGTTATATGGTGGAGGCACAAGCGCAATAAGCAGGCATTCTTTGATGTCAAAGACCGGCACCATGAAGAAGTGTACCTTGGAAACCTGAAGAGGTTCCAATTAAGAGAACTTGAGAATGCTACAAACAACTTCAGCAACAAGAACATACTGGGAAAGGGTGGTTTTGGAAATGTGTACAAAGGAAGACTTCAAGATGGGAGTGTTGTAGCTGTGAAGAGGCTAAAAGATGGGAATGCAATTGGAGGGGAGATTCAGTTTCAGACAGAAGTTGAAATGATCAGCTTGGCAGTGCACAGAAACCTCCTTAAACTTTATGGATTTTGTGTTACAGCAACAGAAAGGCTCTTGGTTTATCCCTACATGTGCAATGGGAGTGTTGCTACACGTCTGAAAGGAAAGCCAACATTGGAGTGGGGAACAAGGAAGCAAATAGCATTAGGAGCAGGAAGAGGACTGCTGTACCTTCATGAGCAGTGTGATCCAAAAATAATCCACAGGGATGTGAAAGCTGCAAACATATTACTTGATGAGTATTGTGAGGCAGTTGTTGGCGATTTTGGGTTGGCAAAGCTTTTGGATCACAAAGACACACATGTCACAACTGCTGTCAGGGGTACTGTGGGCCACATTGCACCTGAATATCTCTCCACAGGCCAGTCCTCTGACAAAACTGATGTCTTTGGATTTGGCATTCTCCTTCTTGAATTGATCACTGGCTTGAGGGCTTTGGAGTTTGGCAAGGCTGCTAACCAAAAAGGTGCTATGCTTGATTGGAACAACTATGACAGGATTGAGCTTGAGGAAATTGTAAAGGTAGCTCTATTGTGCACACAATATCTTCCGGCCCACAGGCCCAAGATGTCTGAGGTTGTGCGCATGCTTGAAGGTGATGGGCTTGCAGAGAAATGGGAAGCCTCACTAAGTGCCCATGACACAACAAAGCCCAACAAAGCCCATGAGTTCTCTTATTCAGATCGTTACTCTGATCTCACTGATGACTCTTCTTTGTTGGCCCAAGCTATGGAGCTTTCTGGCCCAAGATGA 1827 0.4351 MGFSRTAESTLLLVAFFCLLRSAHALLSPKGINFEVQALMAIKASLVDPHGILDNWDGDAVDPCSWNMVTCSPQSFVISLGIPSQNLSGTLSPSIGNLTNLQSVVLQNNNITGPIPSELGKLSMLQTLDLSNNLFNGEIPQSLGHLRTLQYLRLNNNSFSGECPVSVANMAQLSFLDLSYNNLSGSVPRILAKSFSIVGNPLVCTTAKETNCHGMTLMPMSMDLNTTQSASLSGTQKTHKIAIAFGLSLGCLSFIALVFGLVIWWRHKRNKQAFFDVKDRHHEEVYLGNLKRFQLRELENATNNFSNKNILGKGGFGNVYKGRLQDGSVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLKLYGFCVTATERLLVYPYMCNGSVATRLKGKPTLEWGTRKQIALGAGRGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHKDTHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELITGLRALEFGKAANQKGAMLDWNNYDRIELEEIVKVALLCTQYLPAHRPKMSEVVRMLEGDGLAEKWEASLSAHDTTKPNKAHEFSYSDRYSDLTDDSSLLAQAMELSGPR 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Adu10g02558 608 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 6 608 - -
Adu10g02558 608 Gene3D Transferase(Phosphotransferase) domain 1 382 574 - -
Adu10g02558 608 SUPERFAMILY Protein kinase-like (PK-like) 282 556 IPR011009 -
Adu10g02558 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Adu10g02558 608 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Adu10g02558 608 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Adu10g02558 608 Gene3D Ribonuclease Inhibitor 32 214 IPR032675 -
Adu10g02558 608 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Adu10g02558 608 SUPERFAMILY L domain-like 35 197 - -
Adu10g02558 608 Pfam Protein kinase domain 306 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02558 608 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 608 - -
Adu10g02558 608 Gene3D Phosphorylase Kinase; domain 1 274 381 - -
Adu10g02558 608 ProSiteProfiles Protein kinase domain profile. 305 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Adu10g02558 608 SMART serkin_6 305 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Adu10g02558 Adu-Chr10 102146486 102150412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Adu10g02558 7 608 Receptor kinase-like Gene Family AT5G16000 71.132 0.0 915
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Adu10g02558 Pkinase 3.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Adu10g02558 - - gmx:100806650 1003.82